Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
ExoRNase_PH_dom1	Pfam	Exoribonuclease, phosphorolytic domain 1
Ribosomal_S5_D2-typ_fold	SUPERFAMILY	Ribosomal protein S5 domain 2-type fold
Rrp45	CDD	Exosome complex component RRP45
PNPase/RNase_PH_dom_sf	Gene3D	PNPase/RNase PH domain superfamily
ExoRNase_PH_dom2	Pfam	Exoribonuclease, phosphorolytic domain 2
ExoRNase_PH_dom2_sf	SUPERFAMILY	Exoribonuclease, PH domain 2 superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
nuclear-transcribed mRNA catabolic process	Orthology	biological process
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
RNA processing	Orthology	biological process
RNA catabolic process	Orthology	biological process
immune response	Orthology	biological process
identical protein binding	Blast	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
extracellular exosome	Orthology	cellular component
RNA metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
nuclear lumen	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
transcription factor binding	Orthology	molecular function
cellular component organization	Orthology	biological process
mRNA catabolic process	Orthology	biological process
mRNA processing	Orthology	biological process

GO (Orthology)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
3'-5'-exoribonuclease activity	Hs	molecular function
nuclear exosome (RNase complex)	Hs	cellular component
cytoplasmic exosome (RNase complex)	Hs	cellular component
exosome (RNase complex)	Hs	cellular component
nuclear chromosome	Hs	cellular component
exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Hs	biological process
nuclear-transcribed mRNA catabolic process	Hs	biological process
RNA polymerase II activating transcription factor binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
rRNA processing	Hs	biological process
RNA processing	Hs	biological process
immune response	Hs	biological process
AU-rich element binding	Hs	molecular function
positive regulation of cell growth	Hs	biological process
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	Hs	biological process
U1 snRNA 3'-end processing	Hs	biological process
U4 snRNA 3'-end processing	Hs	biological process
U5 snRNA 3'-end processing	Hs	biological process
regulation of mRNA stability	Hs	biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
extracellular exosome	Hs	cellular component
nuclear mRNA surveillance	Hs	biological process
nuclear polyadenylation-dependent rRNA catabolic process	Hs	biological process
nuclear polyadenylation-dependent tRNA catabolic process	Hs	biological process
nuclear polyadenylation-dependent mRNA catabolic process	Hs	biological process

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
3'-5'-exoribonuclease activity	Hs	molecular function	281	7.15e-91
nuclear exosome (RNase complex)	Hs	cellular component	281	7.15e-91
cytoplasmic exosome (RNase complex)	Hs	cellular component	281	7.15e-91
exosome (RNase complex)	Hs	cellular component	281	7.15e-91
nuclear chromosome	Hs	cellular component	281	7.15e-91
RNA polymerase II activating transcription factor binding	Hs	molecular function	281	7.15e-91
RNA binding	Hs	molecular function	281	7.15e-91
protein binding	Hs	molecular function	281	7.15e-91
nucleus	Hs	cellular component	281	7.15e-91
nucleoplasm	Hs	cellular component	281	7.15e-91
nucleolus	Hs	cellular component	281	7.15e-91
cytoplasm	Hs	cellular component	281	7.15e-91
cytosol	Hs	cellular component	281	7.15e-91
AU-rich element binding	Hs	molecular function	281	7.15e-91
identical protein binding	Hs	molecular function	111	4.21e-28
extracellular exosome	Hs	cellular component	281	7.15e-91

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
exosome (RNase complex)	CDD	cellular component	5.51618E-122
RNA processing	CDD	biological process	5.51618E-122

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