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Gene Card

Best human hits

ALKBH1

Species

H.roretzi

Unique Gene ID

Harore.g00015819

Gene Model ID

Harore.CG.MTP2014.S17.g15819

Location

S17:446741..447704

Transcript Models and Sequences

  Harore.CG.MTP2014.S17.g15819.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Alkb PANTHER Alkylated DNA repair protein AlkB
AlkB-like_sf Gene3D Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Oxoglu/Fe-dep_dioxygenase ProSiteProfiles Oxoglutarate/iron-dependent dioxygenase
AlkB-like Pfam Alpha-ketoglutarate-dependent dioxygenase AlkB-like

GOSlim

29 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
nucleus Orthology cellular component
mitochondrion Orthology cellular component
DNA repair Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
metabolic process Orthology biological process
regulation of gene expression Orthology biological process
cell differentiation Orthology biological process
neuron projection development Orthology biological process
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
RNA binding Orthology molecular function
cell migration Orthology biological process
generation of neurons Orthology biological process
RNA processing Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
translational initiation Orthology biological process
iron ion binding Orthology molecular function
DNA metabolic process Orthology biological process
receptor binding Orthology molecular function
molecular function regulator Orthology molecular function
regulation of signal transduction Orthology biological process
chemotaxis Orthology biological process
signaling receptor activity Orthology molecular function
RNA metabolic process Orthology biological process
negative regulation of apoptotic process Orthology biological process
developmental process Orthology biological process
hydrolase activity Orthology molecular function

GO (Orthology)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
neuron migration Hs biological process
tRNA wobble cytosine modification Hs biological process
catalytic activity Hs molecular function
DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
nucleus Hs cellular component
nuclear euchromatin Hs cellular component
mitochondrion Hs cellular component
DNA repair Hs biological process
DNA dealkylation involved in DNA repair Hs biological process
regulation of translation Hs biological process
regulation of translational initiation Hs biological process
cellular response to DNA damage stimulus Hs biological process
metabolic process Hs biological process
ferrous iron binding Hs molecular function
regulation of gene expression Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function
lyase activity Hs molecular function
cell differentiation Hs biological process
neuron projection development Hs biological process
oxidative single-stranded DNA demethylation Hs biological process
chemoattractant activity Hs molecular function
RNA repair Hs biological process
negative regulation of neuron apoptotic process Hs biological process
DNA-N1-methyladenine dioxygenase activity Hs molecular function
metal ion binding Hs molecular function
developmental growth Hs biological process
positive chemotaxis Hs biological process
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process
regulation of mitochondrial translation Hs biological process
methylcytosine dioxygenase activity Hs molecular function
oxidative demethylation Hs biological process
DNA demethylation Hs biological process
1-ethyladenine demethylase activity Hs molecular function
class I DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
class III/IV DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
tRNA demethylase activity Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 195 1.71e-59
catalytic activity Hs molecular function 195 1.71e-59
DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 195 1.71e-59
nucleus Hs cellular component 195 1.71e-59
nuclear euchromatin Hs cellular component 195 1.71e-59
mitochondrion Hs cellular component 195 1.71e-59
ferrous iron binding Hs molecular function 195 1.71e-59
oxidoreductase activity Hs molecular function 195 1.71e-59
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 195 1.71e-59
lyase activity Hs molecular function 195 1.71e-59
chemoattractant activity Hs molecular function 195 1.71e-59
DNA-N1-methyladenine dioxygenase activity Hs molecular function 195 1.71e-59
metal ion binding Hs molecular function 195 1.71e-59
dioxygenase activity Hs molecular function 195 1.71e-59
methylcytosine dioxygenase activity Hs molecular function 195 1.71e-59
1-ethyladenine demethylase activity Hs molecular function 195 1.71e-59
class I DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 195 1.71e-59
class III/IV DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 195 1.71e-59
tRNA demethylase activity Hs molecular function 195 1.71e-59

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA repair PANTHER biological process 7.9E-95
oxidoreductase activity ProSiteProfiles molecular function 9.253
oxidation-reduction process PANTHER biological process 7.9E-95

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