Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

AL136295.5; RNF217; RNF31

Species

H.roretzi

Unique Gene ID

Harore.g00004187

Gene Model ID

Harore.CG.MTP2014.S176.g04187

Location

S176:132102..147027

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
RNF31-UBA Pfam E3 ubiquitin-protein ligase RNF31, UBA-like domain
RNF31 PANTHER E3 ubiquitin-protein ligase RNF31
Znf_B-box ProSiteProfiles B-box-type zinc finger
PUB-like_dom_sf SUPERFAMILY PUB-like domain superfamily
PUB_domain Pfam PUB domain
IBR_dom Pfam IBR domain
Znf_B-box SMART B-box-type zinc finger
Znf_RING ProSiteProfiles Zinc finger, RING-type
IBR_dom SMART IBR domain
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type

GOSlim

23 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
cytosol Orthology cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
protein ubiquitination Orthology biological process
transferase activity Orthology molecular function
ubiquitin protein ligase binding Orthology molecular function
metal ion binding Orthology molecular function
intracellular InterProScan cellular component
zinc ion binding InterProScan molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
intracellular signal transduction Orthology biological process
plasma membrane part Orthology cellular component
integral component of plasma membrane Orthology cellular component
macromolecular complex Orthology cellular component
positive regulation of signal transduction Orthology biological process
cell surface receptor signaling pathway Orthology biological process
immune response Orthology biological process
intracellular part Orthology cellular component
enzyme binding Blast molecular function

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein polyubiquitination Hs biological process
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
cytosol Hs cellular component
I-kappaB kinase/NF-kappaB signaling Hs biological process
cytoplasmic side of plasma membrane Hs cellular component
protein ubiquitination Hs biological process
transferase activity Hs molecular function
ubiquitin protein ligase binding Hs molecular function
CD40 receptor complex Hs cellular component
positive regulation of I-kappaB kinase/NF-kappaB signaling Hs biological process
ubiquitin binding Hs molecular function
metal ion binding Hs molecular function
T cell receptor signaling pathway Hs biological process
positive regulation of NF-kappaB transcription factor activity Hs biological process
LUBAC complex Hs cellular component
protein linear polyubiquitination Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 63.2 7.61e-10
ubiquitin-protein transferase activity Hs molecular function 362 1.82e-105
protein binding Hs molecular function 362 1.82e-105
cytoplasm Hs cellular component 362 1.82e-105
cytosol Hs cellular component 362 1.82e-105
cytoplasmic side of plasma membrane Hs cellular component 362 1.82e-105
membrane Hs cellular component 63.2 7.61e-10
integral component of membrane Hs cellular component 63.2 7.61e-10
transferase activity Hs molecular function 362 1.82e-105
ubiquitin conjugating enzyme binding Hs molecular function 63.2 7.61e-10
ubiquitin protein ligase binding Hs molecular function 362 1.82e-105
CD40 receptor complex Hs cellular component 362 1.82e-105
ubiquitin binding Hs molecular function 362 1.82e-105
metal ion binding Hs molecular function 362 1.82e-105
ubiquitin protein ligase activity Hs molecular function 63.2 7.61e-10
LUBAC complex Hs cellular component 362 1.82e-105

GO (InterProScan)

4 results

GO Term Analysis Type e-value
ubiquitin-protein transferase activity PANTHER molecular function 7.9E-243
LUBAC complex PANTHER cellular component 7.9E-243
intracellular SMART cellular component 0.27
zinc ion binding SMART molecular function 0.27