Gene Card
Best human hits
RNF20; RNF40
Species
Unique Gene ID
Harore.g00010973
Gene Model ID
Harore.CG.MTP2014.S183.g10973
Location
S183:46815..56475
Transcript Models and Sequences
Harore.CG.MTP2014.S183.g10973.01.t
Harore.CG.MTP2014.S183.g10973.02.t
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING | SMART | Zinc finger, RING-type |
| Znf_C3HC4_RING-type | Pfam | Zinc finger, C3HC4 RING-type |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_RING_CS | ProSitePatterns | Zinc finger, RING-type, conserved site |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| E3_ubiquit_lig_Bre1 | PANTHER | E3 ubiquitin ligase Bre1 |
GOSlim
27 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| chromatin binding | Blast | molecular function |
| transcription coactivator activity | Blast | molecular function |
| catalytic activity | Blast | molecular function |
| ubiquitin-protein transferase activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Blast | cellular component |
| cytosol | Blast | cellular component |
| membrane | Blast | cellular component |
| protein ubiquitination | InterProScan | biological process |
| transferase activity | Blast | molecular function |
| ubiquitin protein ligase binding | Blast | molecular function |
| protein homodimerization activity | Blast | molecular function |
| neuron projection | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| RNA binding | Blast | molecular function |
| membrane part | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| intracellular organelle part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| cell projection part | Blast | cellular component |
| axon | Blast | cellular component |
| synapse part | Blast | cellular component |
| organelle organization | InterProScan | biological process |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ubiquitin ligase complex | Hs | cellular component | 377 | 2.87e-115 |
| p53 binding | Hs | molecular function | 338 | 3.93e-101 |
| chromatin binding | Hs | molecular function | 338 | 3.93e-101 |
| transcription coactivator activity | Hs | molecular function | 338 | 3.93e-101 |
| mRNA 3'-UTR binding | Hs | molecular function | 377 | 2.87e-115 |
| catalytic activity | Hs | molecular function | 338 | 3.93e-101 |
| ubiquitin-protein transferase activity | Hs | molecular function | 377 | 2.87e-115 |
| protein binding | Hs | molecular function | 377 | 2.87e-115 |
| nucleus | Hs | cellular component | 377 | 2.87e-115 |
| nucleoplasm | Hs | cellular component | 377 | 2.87e-115 |
| nucleolus | Hs | cellular component | 338 | 3.93e-101 |
| cytosol | Hs | cellular component | 377 | 2.87e-115 |
| membrane | Hs | cellular component | 377 | 2.87e-115 |
| transferase activity | Hs | molecular function | 377 | 2.87e-115 |
| syntaxin-1 binding | Hs | molecular function | 377 | 2.87e-115 |
| extrinsic component of membrane | Hs | cellular component | 377 | 2.87e-115 |
| ubiquitin conjugating enzyme binding | Hs | molecular function | 377 | 2.87e-115 |
| ubiquitin protein ligase binding | Hs | molecular function | 377 | 2.87e-115 |
| HULC complex | Hs | cellular component | 377 | 2.87e-115 |
| histone binding | Hs | molecular function | 338 | 3.93e-101 |
| protein homodimerization activity | Hs | molecular function | 377 | 2.87e-115 |
| neuron projection | Hs | cellular component | 377 | 2.87e-115 |
| axon terminus | Hs | cellular component | 377 | 2.87e-115 |
| metal ion binding | Hs | molecular function | 377 | 2.87e-115 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ubiquitin-protein transferase activity | PANTHER | molecular function | 9.6E-249 |
| histone monoubiquitination | PANTHER | biological process | 9.6E-249 |
| metal ion binding | Pfam | molecular function | 6.1E-5 |
