Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CLEC4E; COLEC11; SFTPD

Species

H.roretzi

Unique Gene ID

Harore.g00014877

Gene Model ID

Harore.CG.MTP2014.S1838.g14877

Location

S1838:493..1102

Transcript Models and Sequences

  Harore.CG.MTP2014.S1838.g14877.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
C-type_lectin-like ProSiteProfiles C-type lectin-like
C-type_lectin-like Pfam C-type lectin-like
C-type_lectin-like/link_sf Gene3D C-type lectin-like/link domain superfamily
CTDL_fold SUPERFAMILY C-type lectin fold
C-type_lectin-like SMART C-type lectin-like

GOSlim

16 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
lysosome Blast cellular component
endoplasmic reticulum membrane Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
identical protein binding Blast molecular function
small molecule binding Blast molecular function
macromolecular complex Blast cellular component
cytoplasmic vesicle Blast cellular component
binding Blast molecular function
endomembrane system Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase activity Hs molecular function 72.0 3.26e-15
receptor activity Hs molecular function 63.9 1.20e-12
protein binding Hs molecular function 72.8 3.60e-15
mannose binding Hs molecular function 72.0 3.26e-15
extracellular region Hs cellular component 72.8 3.60e-15
proteinaceous extracellular matrix Hs cellular component 72.8 3.60e-15
collagen trimer Hs cellular component 72.8 3.60e-15
extracellular space Hs cellular component 72.8 3.60e-15
cytoplasm Hs cellular component 72.8 3.60e-15
lysosome Hs cellular component 72.8 3.60e-15
endoplasmic reticulum membrane Hs cellular component 72.8 3.60e-15
plasma membrane Hs cellular component 63.9 1.20e-12
membrane Hs cellular component 63.9 1.20e-12
integral component of membrane Hs cellular component 63.9 1.20e-12
endocytic vesicle Hs cellular component 72.8 3.60e-15
carbohydrate binding Hs molecular function 72.8 3.60e-15
lamellar body Hs cellular component 72.8 3.60e-15
identical protein binding Hs molecular function 72.8 3.60e-15
clathrin-coated endocytic vesicle Hs cellular component 72.8 3.60e-15

GO (InterProScan)

No result

GO Term Analysis Type e-value