Gene Card
Best human hits
HNRNPDL; RBM23; RBM39
Species
Unique Gene ID
Harore.g00011015
Gene Model ID
Harore.CG.MTP2014.S186.g11015
Location
S186:9268..10431
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RBM39_SF | TIGRFAM | Splicing factor, RBM39-like |
| RBM39_linker | Pfam | Splicing factor RBM39, linker |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
GOSlim
15 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| microtubule organizing center | Blast | cellular component |
| cytosol | Blast | cellular component |
| mRNA processing | InterProScan | biological process |
| microtubule cytoskeleton | Blast | cellular component |
| membrane | Blast | cellular component |
| nuclear speck | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 374 | 2.63e-126 |
| DNA binding | Hs | molecular function | 85.9 | 2.17e-18 |
| RNA binding | Hs | molecular function | 374 | 2.63e-126 |
| protein binding | Hs | molecular function | 374 | 2.63e-126 |
| nucleus | Hs | cellular component | 374 | 2.63e-126 |
| nucleoplasm | Hs | cellular component | 374 | 2.63e-126 |
| cytoplasm | Hs | cellular component | 85.9 | 2.17e-18 |
| microtubule organizing center | Hs | cellular component | 374 | 2.63e-126 |
| cytosol | Hs | cellular component | 85.9 | 2.17e-18 |
| microtubule cytoskeleton | Hs | cellular component | 374 | 2.63e-126 |
| membrane | Hs | cellular component | 334 | 6.45e-112 |
| nuclear speck | Hs | cellular component | 374 | 2.63e-126 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 85.9 | 2.17e-18 |
| macromolecular complex | Hs | cellular component | 374 | 2.63e-126 |
| extracellular exosome | Hs | cellular component | 85.9 | 2.17e-18 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.48E-28 |
| RNA binding | TIGRFAM | molecular function | 9.3E-112 |
| nucleus | TIGRFAM | cellular component | 9.3E-112 |
| mRNA processing | TIGRFAM | biological process | 9.3E-112 |
