Aniseed - Gene card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
COMPASS_Set1_N-SET	SMART	COMPASS complex Set1 subunit, N-SET domain
SETD1B	PANTHER	Histone-lysine N-methyltransferase SETD1B
SET_dom	Pfam	SET domain
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom	ProSiteProfiles	RNA recognition motif domain
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
RRM_dom	Pfam	RNA recognition motif domain
RRM_dom	SMART	RNA recognition motif domain
SET_dom	ProSiteProfiles	SET domain
SET_dom	SMART	SET domain

GOSlim

36 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription factor binding	Blast	molecular function
zinc ion binding	Blast	molecular function
nuclear speck	Blast	cellular component
transferase activity	Orthology	molecular function
identical protein binding	Blast	molecular function
protein homodimerization activity	Blast	molecular function
transcription regulatory region DNA binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
positive regulation of cell proliferation	Orthology	biological process
organelle organization	Orthology	biological process
metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell development	Orthology	biological process
gamete generation	Orthology	biological process
negative regulation of transcription, DNA-templated	Orthology	biological process
response to stimulus	Orthology	biological process
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
transcription regulatory region sequence-specific DNA binding	Blast	molecular function
sequence-specific double-stranded DNA binding	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

27 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
histone-lysine N-methyltransferase activity	Hs	molecular function
methylation	Hs	biological process
histone lysine methylation	Hs	biological process
histone methyltransferase complex	Hs	cellular component
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
histone H3-K4 methylation	Hs	biological process
oocyte growth	Hs	biological process
chromatin silencing	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
transferase activity, transferring acyl groups	Hs	molecular function
response to estrogen	Hs	biological process
MLL3/4 complex	Hs	cellular component
oogenesis	Hs	biological process

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	278	2.34e-75
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	158	1.84e-38
core promoter sequence-specific DNA binding	Hs	molecular function	158	1.84e-38
nucleic acid binding	Hs	molecular function	278	2.34e-75
DNA binding	Hs	molecular function	158	1.84e-38
AT DNA binding	Hs	molecular function	158	1.84e-38
chromatin binding	Hs	molecular function	158	1.84e-38
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	158	1.84e-38
RNA binding	Hs	molecular function	278	2.34e-75
protein binding	Hs	molecular function	278	2.34e-75
nucleus	Hs	cellular component	278	2.34e-75
nucleoplasm	Hs	cellular component	278	2.34e-75
chromosome	Hs	cellular component	278	2.34e-75
cytosol	Hs	cellular component	275	3.12e-74
beta-catenin binding	Hs	molecular function	278	2.34e-75
transcription factor binding	Hs	molecular function	278	2.34e-75
methyltransferase activity	Hs	molecular function	278	2.34e-75
zinc ion binding	Hs	molecular function	158	1.84e-38
nuclear speck	Hs	cellular component	278	2.34e-75
transferase activity	Hs	molecular function	278	2.34e-75
histone-lysine N-methyltransferase activity	Hs	molecular function	278	2.34e-75
histone methyltransferase complex	Hs	cellular component	278	2.34e-75
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function	278	2.34e-75
identical protein binding	Hs	molecular function	158	1.84e-38
protein homodimerization activity	Hs	molecular function	158	1.84e-38
transcription regulatory region DNA binding	Hs	molecular function	158	1.84e-38
unmethylated CpG binding	Hs	molecular function	158	1.84e-38
metal ion binding	Hs	molecular function	158	1.84e-38
Set1C/COMPASS complex	Hs	cellular component	278	2.34e-75
lysine-acetylated histone binding	Hs	molecular function	158	1.84e-38
MLL1 complex	Hs	cellular component	158	1.84e-38

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	5.13E-10
protein binding	SMART	molecular function	6.3E-36
histone-lysine N-methyltransferase activity	PANTHER	molecular function	4.7E-150
Set1C/COMPASS complex	PANTHER	cellular component	4.7E-150
histone H3-K4 methylation	PANTHER	biological process	4.7E-150

Gene Card

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