Aniseed - Gene card

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

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Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
FHA_dom	ProSiteProfiles	Forkhead-associated (FHA) domain
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
FHA_dom	SMART	Forkhead-associated (FHA) domain
Fork_head_dom	CDD	Fork head domain
Fork_head_dom	ProSiteProfiles	Fork head domain
Fork_head_dom	Pfam	Fork head domain
Fork_head_dom	SMART	Fork head domain
TF_fork_head_CS_1	ProSitePatterns	Fork head domain conserved site1
SMAD_FHA_dom_sf	SUPERFAMILY	SMAD/FHA domain superfamily
FHA_dom	CDD	Forkhead-associated (FHA) domain
Fork_head_dom	PRINTS	Fork head domain
TF_fork_head_CS_2	ProSitePatterns	Fork head domain conserved site 2
FHA_dom	Pfam	Forkhead-associated (FHA) domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
magnesium ion binding	Orthology	molecular function
transcription regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
animal organ development	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function

GO (Orthology)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
magnesium ion binding	Hs	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
muscle organ development	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
protein deubiquitination	Hs	biological process
cell differentiation	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
magnesium ion binding	Hs	molecular function	361	3.53e-116
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	125	8.16e-31
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	369	2.22e-118
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	361	3.53e-116
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	369	2.22e-118
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	361	3.53e-116
DNA binding	Hs	molecular function	369	2.22e-118
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	369	2.22e-118
protein binding	Hs	molecular function	369	2.22e-118
nucleus	Hs	cellular component	369	2.22e-118
nucleoplasm	Hs	cellular component	369	2.22e-118
cytoplasm	Hs	cellular component	369	2.22e-118
sequence-specific DNA binding	Hs	molecular function	369	2.22e-118
metal ion binding	Hs	molecular function	361	3.53e-116

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	1.5E-48
protein binding	SUPERFAMILY	molecular function	1.7E-14
regulation of transcription, DNA-templated	SMART	biological process	1.5E-48
sequence-specific DNA binding	SMART	molecular function	1.5E-48

Gene Card

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