Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
DapA-like	Pfam	DapA-like
DapA-like	SMART	DapA-like
Schiff_base-form_aldolases_AS	ProSitePatterns	Schiff base-forming aldolase, active site
DapA-like	PRINTS	DapA-like
Aldolase_TIM	Gene3D	Aldolase-type TIM barrel
DapA-like	PANTHER	DapA-like

GOSlim

21 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
lysosomal membrane	Blast	cellular component
endosome	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cellular biosynthetic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
phosphotransferase activity, alcohol group as acceptor	Blast	molecular function
kinase activity	Blast	molecular function
Golgi apparatus part	Blast	cellular component

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
metabolic process	Hs	biological process
4-hydroxy-2-oxoglutarate aldolase activity	Hs	molecular function
glyoxylate catabolic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
lyase activity	Hs	molecular function
protein homodimerization activity	Hs	molecular function
pyruvate biosynthetic process	Hs	biological process
glyoxylate metabolic process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
catalytic activity	Hs	molecular function	340	5.73e-116
1-phosphatidylinositol 4-kinase activity	Hs	molecular function	59.7	1.19e-09
protein binding	Hs	molecular function	67.4	1.80e-12
cytoplasm	Hs	cellular component	67.4	1.80e-12
mitochondrion	Hs	cellular component	340	5.73e-116
mitochondrial matrix	Hs	cellular component	340	5.73e-116
lysosomal membrane	Hs	cellular component	59.7	1.19e-09
endosome	Hs	cellular component	59.7	1.19e-09
trans-Golgi network	Hs	cellular component	59.7	1.19e-09
cytosol	Hs	cellular component	67.4	1.80e-12
plasma membrane	Hs	cellular component	59.7	1.19e-09
4-hydroxy-2-oxoglutarate aldolase activity	Hs	molecular function	340	5.73e-116
N-acetylneuraminate lyase activity	Hs	molecular function	67.4	1.80e-12
membrane	Hs	cellular component	340	5.73e-116
integral component of membrane	Hs	cellular component	340	5.73e-116
lyase activity	Hs	molecular function	340	5.73e-116
identical protein binding	Hs	molecular function	67.4	1.80e-12
protein homodimerization activity	Hs	molecular function	340	5.73e-116
extracellular exosome	Hs	cellular component	340	5.73e-116

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	1.9E-105
metabolic process	PANTHER	biological process	1.3E-95
lyase activity	PANTHER	molecular function	1.3E-95

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location