Gene Card
Best human hits
LSM10; LSM2; LSM4
Species
Unique Gene ID
Harore.g00012678
Gene Model ID
Harore.CG.MTP2014.S21.g12678
Location
S21:151552..151882
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| LSM_dom_sf | SUPERFAMILY | LSM domain superfamily |
| LSM_dom_euk/arc | SMART | LSM domain, eukaryotic/archaea-type |
| LSM_dom_euk/arc | Pfam | LSM domain, eukaryotic/archaea-type |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| cytosol | Blast | cellular component |
| mRNA processing | Orthology | biological process |
| RNA splicing | Orthology | biological process |
| membrane | Blast | cellular component |
| nuclear body | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| neuron projection | Blast | cellular component |
| nuclear part | Orthology | cellular component |
| transcription from RNA polymerase II promoter | Orthology | biological process |
| G1/S transition of mitotic cell cycle | Orthology | biological process |
| cytoplasmic part | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| enzyme binding | Blast | molecular function |
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| U7 snRNP | Hs | cellular component |
| termination of RNA polymerase II transcription | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| Cajal body | Hs | cellular component |
| nuclear body | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| histone pre-mRNA DCP binding | Hs | molecular function |
| U7 snRNA binding | Hs | molecular function |
| positive regulation of G1/S transition of mitotic cell cycle | Hs | biological process |
GO (Blast)
25 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 42.7 | 7.57e-06 |
| RNA binding | Hs | molecular function | 78.6 | 4.32e-20 |
| protein binding | Hs | molecular function | 78.6 | 4.32e-20 |
| nucleus | Hs | cellular component | 78.6 | 4.32e-20 |
| nucleoplasm | Hs | cellular component | 78.6 | 4.32e-20 |
| spliceosomal complex | Hs | cellular component | 42.7 | 7.57e-06 |
| U7 snRNP | Hs | cellular component | 78.6 | 4.32e-20 |
| U6 snRNP | Hs | cellular component | 42.7 | 7.57e-06 |
| cytosol | Hs | cellular component | 42.7 | 7.57e-06 |
| Cajal body | Hs | cellular component | 78.6 | 4.32e-20 |
| membrane | Hs | cellular component | 42.7 | 7.57e-06 |
| nuclear body | Hs | cellular component | 78.6 | 4.32e-20 |
| U6 snRNA binding | Hs | molecular function | 42.7 | 7.57e-06 |
| Ral GTPase binding | Hs | molecular function | 38.9 | 5.99e-05 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 78.6 | 4.32e-20 |
| macromolecular complex | Hs | cellular component | 42.7 | 7.57e-06 |
| PH domain binding | Hs | molecular function | 42.7 | 7.57e-06 |
| neuron projection | Hs | cellular component | 42.7 | 7.57e-06 |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component | 38.9 | 5.99e-05 |
| precatalytic spliceosome | Hs | cellular component | 38.9 | 5.99e-05 |
| catalytic step 2 spliceosome | Hs | cellular component | 38.9 | 5.99e-05 |
| histone pre-mRNA DCP binding | Hs | molecular function | 78.6 | 4.32e-20 |
| U7 snRNA binding | Hs | molecular function | 78.6 | 4.32e-20 |
| spliceosomal tri-snRNP complex | Hs | cellular component | 42.7 | 7.57e-06 |
| Lsm1-7-Pat1 complex | Hs | cellular component | 38.9 | 5.99e-05 |
| GO Term | Analysis | Type | e-value |
|---|
