Aniseed - Gene card

Gene Card

Best human hits

ZFP36; ZFP36L1; ZFP36L2

Species

H.roretzi

Unique Gene ID

Harore.g00011242

Gene Model ID

Harore.CG.MTP2014.S22.g11242

Location

S22:73091..74505

Transcript Models and Sequences

Harore.CG.MTP2014.S22.g11242.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_CCCH_sf	SUPERFAMILY	Zinc finger, CCCH-type superfamily
Znf_CCCH	ProSiteProfiles	Zinc finger, CCCH-type
Znf_CCCH	SMART	Zinc finger, CCCH-type
Tis11B_N	Pfam	Tis11B-like protein, N-terminal
Znf_CCCH	Pfam	Zinc finger, CCCH-type

GOSlim

14 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
metal ion binding	Blast	molecular function
cytoplasmic part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
macromolecular complex	Blast	cellular component
intracellular part	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
P-body	Hs	cellular component	159	2.83e-45
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	159	2.83e-45
DNA binding	Hs	molecular function	159	2.83e-45
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	159	2.83e-45
RNA binding	Hs	molecular function	159	2.83e-45
mRNA binding	Hs	molecular function	159	2.83e-45
protein binding	Hs	molecular function	159	2.83e-45
nucleus	Hs	cellular component	159	2.83e-45
cytoplasm	Hs	cellular component	159	2.83e-45
cytosol	Hs	cellular component	159	2.83e-45
AU-rich element binding	Hs	molecular function	159	2.83e-45
CCR4-NOT complex	Hs	cellular component	113	2.65e-28
intracellular ribonucleoprotein complex	Hs	cellular component	159	2.83e-45
mRNA 3'-UTR AU-rich region binding	Hs	molecular function	159	2.83e-45
metal ion binding	Hs	molecular function	159	2.83e-45
RNA polymerase binding	Hs	molecular function	113	2.65e-28
14-3-3 protein binding	Hs	molecular function	159	2.83e-45
ribonucleoprotein complex	Hs	cellular component	113	2.65e-28

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
metal ion binding	Pfam	molecular function	5.3E-11