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GENE CARD

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Gene Card

Best human hits

NELFE

Species

H.roretzi

Unique Gene ID

Harore.g00015057

Gene Model ID

Harore.CG.MTP2014.S241.g15057

Location

S241:81715..83219

Transcript Models and Sequences

  Harore.CG.MTP2014.S241.g15057.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
NELFE PANTHER Negative elongation factor E
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily

GOSlim

22 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
plasma membrane Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
nuclear body Orthology cellular component
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
chromatin binding Orthology molecular function
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
mRNA processing Orthology biological process
negative regulation of gene expression Orthology biological process
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
plasma membrane Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
nuclear body Hs cellular component
NELF complex Hs cellular component
negative regulation of mRNA polyadenylation Hs biological process
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromatin binding Hs molecular function
negative regulation of transcription elongation from RNA polymerase II promoter Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
positive regulation of histone H3-K4 methylation Hs biological process
positive regulation of ERK1 and ERK2 cascade Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleic acid binding Hs molecular function 108 2.35e-26
RNA binding Hs molecular function 108 2.35e-26
protein binding Hs molecular function 108 2.35e-26
nucleus Hs cellular component 108 2.35e-26
nucleoplasm Hs cellular component 108 2.35e-26
plasma membrane Hs cellular component 108 2.35e-26
nuclear body Hs cellular component 108 2.35e-26
NELF complex Hs cellular component 108 2.35e-26

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 4.07E-16
regulation of transcription, DNA-templated PANTHER biological process 2.9E-58
NELF complex PANTHER cellular component 2.9E-58

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