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Gene Card

Best human hits

PRDM11; PRDM7; PRDM9

Species

H.roretzi

Unique Gene ID

Harore.g00001961

Gene Model ID

Harore.CG.MTP2014.S271.g01961

Location

S271:54636..60420

Transcript Models and Sequences

  Harore.CG.MTP2014.S271.g01961.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
SET_dom Pfam SET domain
SET_dom SMART SET domain
SET_dom ProSiteProfiles SET domain

GOSlim

18 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
transferase activity Orthology molecular function
metal ion binding Orthology molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
reproductive process Orthology biological process
DNA metabolic process Orthology biological process
organelle organization Orthology biological process
metabolic process Orthology biological process
cellular protein modification process Orthology biological process

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleic acid binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
meiotic gene conversion Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
methyltransferase activity Hs molecular function
positive regulation of reciprocal meiotic recombination Hs biological process
transferase activity Hs molecular function
histone-lysine N-methyltransferase activity Hs molecular function
methylation Hs biological process
histone lysine methylation Hs biological process
metal ion binding Hs molecular function
meiotic cell cycle Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 181 4.47e-50
nucleic acid binding Hs molecular function 181 4.47e-50
protein binding Hs molecular function 181 4.47e-50
intracellular Hs cellular component 181 4.47e-50
nucleus Hs cellular component 181 4.47e-50
nucleoplasm Hs cellular component 179 1.86e-47
chromosome Hs cellular component 181 4.47e-50
cytoplasm Hs cellular component 125 8.23e-30
methyltransferase activity Hs molecular function 181 4.47e-50
transferase activity Hs molecular function 181 4.47e-50
histone-lysine N-methyltransferase activity Hs molecular function 181 4.47e-50
metal ion binding Hs molecular function 179 1.86e-47

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding ProSitePatterns molecular function
protein binding SMART molecular function 7.5E-9

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