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GENE CARD

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Gene Card

Best human hits

CYP4F12; CYP4F3; EXOSC10

Species

H.roretzi

Unique Gene ID

Harore.g00002235

Gene Model ID

Harore.CG.MTP2014.S277.g02235

Location

S277:0..8076

Transcript Models and Sequences

  Harore.CG.MTP2014.S277.g02235.01.t

External Database Gene Card

External database links

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Cyt_P450_sf Gene3D Cytochrome P450 superfamily
Exosome-assoc_fac_Rrp6_N Pfam Exosome-associated factor Rrp6, N-terminal
Cyt_P450_sf SUPERFAMILY Cytochrome P450 superfamily
HRDC_dom ProSiteProfiles HRDC domain
Cyt_P450 PRINTS Cytochrome P450
Cyt_P450_E_grp-I PRINTS Cytochrome P450, E-class, group I
3'-5'_exonuclease_dom Pfam 3'-5' exonuclease domain
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
3'-5'_exonuclease_dom SMART 3'-5' exonuclease domain
Cyt_P450 Pfam Cytochrome P450
HRDC_dom Pfam HRDC domain
HRDC_dom SMART HRDC domain
HRDC-like_sf SUPERFAMILY HRDC-like superfamily

GOSlim

41 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
catalytic activity Orthology molecular function
iron ion binding Orthology molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
cytosol Blast cellular component
nucleobase-containing compound metabolic process InterProScan biological process
RNA processing InterProScan biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
apical plasma membrane Orthology cellular component
hydrolase activity Blast molecular function
heme binding Orthology molecular function
organelle membrane Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
cellular metabolic process Orthology biological process
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular space Orthology cellular component
cellular aromatic compound metabolic process Orthology biological process
blood coagulation Orthology biological process
extracellular exosome Orthology cellular component
organic substance metabolic process Orthology biological process
small molecule binding Orthology molecular function
anion binding Orthology molecular function
defense response Orthology biological process
binding Orthology molecular function
RNA metabolic process Blast biological process
nuclear lumen Blast cellular component
macromolecular complex Blast cellular component
intracellular part Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

50 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
very long-chain fatty acid metabolic process Hs biological process
long-chain fatty acid metabolic process Hs biological process
renal water homeostasis Hs biological process
monooxygenase activity Hs molecular function
iron ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
lipid metabolic process Hs biological process
leukotriene metabolic process Hs biological process
arachidonic acid epoxygenase activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
apical plasma membrane Hs cellular component
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function
alkane 1-monooxygenase activity Hs molecular function
arachidonic acid metabolic process Hs biological process
oxygen binding Hs molecular function
heme binding Hs molecular function
organelle membrane Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
metal ion binding Hs molecular function
leukotriene-B4 20-monooxygenase activity Hs molecular function
tocopherol omega-hydroxylase activity Hs molecular function
alpha-tocopherol omega-hydroxylase activity Hs molecular function
sodium ion homeostasis Hs biological process
oxidation-reduction process Hs biological process
aromatase activity Hs molecular function
20-hydroxy-leukotriene B4 omega oxidase activity Hs molecular function
20-aldehyde-leukotriene B4 20-monooxygenase activity Hs molecular function
fatty acid binding Hs molecular function
extracellular space Hs cellular component
fatty acid metabolic process Hs biological process
prostaglandin metabolic process Hs biological process
cellular aromatic compound metabolic process Hs biological process
inflammatory response Hs biological process
blood coagulation Hs biological process
drug binding Hs molecular function
regulation of blood pressure Hs biological process
toxic substance binding Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Hs molecular function
fluorene oxygenase activity Hs molecular function
regulation of lipid metabolic process Hs biological process
arachidonic acid omega-hydroxylase activity Hs molecular function
tocotrienol omega-hydroxylase activity Hs molecular function
extracellular exosome Hs cellular component
laurate hydroxylase activity Hs molecular function
16-hydroxypalmitate dehydrogenase activity Hs molecular function

GO (Blast)

43 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 577 0.0
3'-5'-exoribonuclease activity Hs molecular function 577 0.0
nuclear exosome (RNase complex) Hs cellular component 577 0.0
exosome (RNase complex) Hs cellular component 577 0.0
nucleic acid binding Hs molecular function 577 0.0
RNA binding Hs molecular function 577 0.0
catalytic activity Hs molecular function 577 0.0
monooxygenase activity Hs molecular function 338 2.86e-104
nuclease activity Hs molecular function 577 0.0
exonuclease activity Hs molecular function 577 0.0
exoribonuclease activity Hs molecular function 577 0.0
iron ion binding Hs molecular function 338 2.86e-104
protein binding Hs molecular function 577 0.0
intracellular Hs cellular component 577 0.0
nucleus Hs cellular component 577 0.0
nucleoplasm Hs cellular component 577 0.0
nucleolus Hs cellular component 577 0.0
cytoplasm Hs cellular component 577 0.0
endoplasmic reticulum Hs cellular component 338 2.86e-104
endoplasmic reticulum membrane Hs cellular component 338 2.86e-104
cytosol Hs cellular component 577 0.0
arachidonic acid epoxygenase activity Hs molecular function 336 1.00e-103
3'-5' exonuclease activity Hs molecular function 577 0.0
membrane Hs cellular component 577 0.0
integral component of membrane Hs cellular component 338 2.86e-104
apical plasma membrane Hs cellular component 336 1.00e-103
oxidoreductase activity Hs molecular function 338 2.86e-104
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 338 2.86e-104
hydrolase activity Hs molecular function 577 0.0
alkane 1-monooxygenase activity Hs molecular function 336 1.00e-103
oxygen binding Hs molecular function 338 2.86e-104
heme binding Hs molecular function 338 2.86e-104
organelle membrane Hs cellular component 338 2.86e-104
transcriptionally active chromatin Hs cellular component 577 0.0
intracellular membrane-bounded organelle Hs cellular component 338 2.86e-104
metal ion binding Hs molecular function 338 2.86e-104
leukotriene-B4 20-monooxygenase activity Hs molecular function 338 2.86e-104
tocopherol omega-hydroxylase activity Hs molecular function 338 2.86e-104
alpha-tocopherol omega-hydroxylase activity Hs molecular function 338 2.86e-104
telomerase RNA binding Hs molecular function 577 0.0
aromatase activity Hs molecular function 336 1.00e-103
20-hydroxy-leukotriene B4 omega oxidase activity Hs molecular function 338 2.86e-104
20-aldehyde-leukotriene B4 20-monooxygenase activity Hs molecular function 338 2.86e-104

GO (InterProScan)

13 results

GO Term Analysis Type e-value
nucleotide binding SUPERFAMILY molecular function 5.01E-24
nuclear exosome (RNase complex) Pfam cellular component 2.8E-17
nucleic acid binding SMART molecular function 5.6E-47
catalytic activity SUPERFAMILY molecular function 5.01E-24
iron ion binding Gene3D molecular function 1.8E-88
intracellular SMART cellular component 7.5E-21
nucleobase-containing compound metabolic process SMART biological process 5.6E-47
RNA processing Pfam biological process 2.8E-17
3'-5' exonuclease activity SMART molecular function 5.6E-47
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Gene3D molecular function 1.8E-88
heme binding Gene3D molecular function 1.8E-88
cellular metabolic process SUPERFAMILY biological process 5.01E-24
oxidation-reduction process Gene3D biological process 1.8E-88

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