Aniseed - Gene card

Gene Card

Best human hits

LONRF1; LONRF2; LONRF3

Species

H.roretzi

Unique Gene ID

Harore.g00015636

Gene Model ID

Harore.CG.MTP2014.S28.g15636

Location

S28:51205..57717

Transcript Models and Sequences

Harore.CG.MTP2014.S28.g15636.01.t
Harore.CG.MTP2014.S28.g15636.02.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
PUA-like_sf	SUPERFAMILY	PUA-like superfamily
Znf_RING_CS	ProSitePatterns	Zinc finger, RING-type, conserved site
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
Lon_substr-bd	Pfam	Lon, substrate-binding domain
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
Lon_substr-bd	SMART	Lon, substrate-binding domain
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type
Znf_RING	SMART	Zinc finger, RING-type
Lon_substr-bd	ProSiteProfiles	Lon, substrate-binding domain
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain
Znf-RING_LisH	Pfam	RING-type zinc-finger, LisH dimerisation motif
TPR_repeat	SMART	Tetratricopeptide repeat

GOSlim

8 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
cytosol	Orthology	cellular component
metal ion binding	Orthology	molecular function
enzyme binding	Orthology	molecular function
proteolysis	Orthology	biological process

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
cytosol	Hs	cellular component
ubiquitin conjugating enzyme binding	Hs	molecular function
positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
metal ion binding	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin-protein transferase activity	Hs	molecular function	332	2.87e-102
protein binding	Hs	molecular function	332	2.87e-102
intracellular	Hs	cellular component	332	2.87e-102
cytosol	Hs	cellular component	332	2.87e-102
ubiquitin conjugating enzyme binding	Hs	molecular function	332	2.87e-102
metal ion binding	Hs	molecular function	332	2.87e-102
ubiquitin protein ligase activity	Hs	molecular function	332	2.87e-102

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	5.9E-16