Aniseed - Gene card

Gene 'Harore.CG.MTP2014.S2...'

Gene Card

Best human hits

HAGHL; LACTB2; PNKD

Species

H.roretzi

Unique Gene ID

Harore.g00010098

Gene Model ID

Harore.CG.MTP2014.S29.g10098

Location

S29:440467..441343

Transcript Models and Sequences

Harore.CG.MTP2014.S29.g10098.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Metallo-B-lactamas	SMART	Metallo-beta-lactamase
Metallo-B-lactamas	Pfam	Metallo-beta-lactamase
RibonucZ/Hydroxyglut_hydro	SUPERFAMILY	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
RibonucZ/Hydroxyglut_hydro	Gene3D	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily

GOSlim

11 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
zinc ion binding	Orthology	molecular function
membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
RNA metabolic process	Orthology	biological process

GO (Orthology)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
single-stranded RNA binding	Hs	molecular function
nuclease activity	Hs	molecular function
endonuclease activity	Hs	molecular function
endoribonuclease activity	Hs	molecular function
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
zinc ion binding	Hs	molecular function
hydrolase activity	Hs	molecular function
metal ion binding	Hs	molecular function
RNA phosphodiester bond hydrolysis, endonucleolytic	Hs	biological process

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	290	2.22e-98
single-stranded RNA binding	Hs	molecular function	290	2.22e-98
hydroxyacylglutathione hydrolase activity	Hs	molecular function	46.2	9.13e-06
nuclease activity	Hs	molecular function	290	2.22e-98
endonuclease activity	Hs	molecular function	290	2.22e-98
endoribonuclease activity	Hs	molecular function	290	2.22e-98
protein binding	Hs	molecular function	290	2.22e-98
nucleus	Hs	cellular component	42.0	2.59e-04
cytoplasm	Hs	cellular component	42.0	2.59e-04
mitochondrion	Hs	cellular component	290	2.22e-98
mitochondrial matrix	Hs	cellular component	290	2.22e-98
zinc ion binding	Hs	molecular function	290	2.22e-98
membrane	Hs	cellular component	42.0	2.59e-04
hydrolase activity	Hs	molecular function	290	2.22e-98
metal ion binding	Hs	molecular function	290	2.22e-98

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value