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  1. Gene 'Boschl.CG.Botznik201...' > 
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Gene Card

Best human hits

COL11A2; COL5A3

Species

H.roretzi

Unique Gene ID

Harore.g00008604

Gene Model ID

Harore.CG.MTP2014.S294.g08604

Location

S294:73673..90821

Transcript Models and Sequences

  Harore.CG.MTP2014.S294.g08604.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Fib_collagen_C SMART Fibrillar collagen, C-terminal
Fib_collagen_C ProDom Fibrillar collagen, C-terminal
Collagen Pfam Collagen triple helix repeat
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Fib_collagen_C ProSiteProfiles Fibrillar collagen, C-terminal
Fib_collagen_C Pfam Fibrillar collagen, C-terminal

GOSlim

35 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Orthology cellular component
endoplasmic reticulum lumen Orthology cellular component
ribosome Orthology cellular component
sensory perception of sound Orthology biological process
extracellular matrix organization Orthology biological process
metal ion binding Orthology molecular function
extracellular exosome Orthology cellular component
blood vessel development Orthology biological process
integrin binding Orthology molecular function
extracellular space Orthology cellular component
cell adhesion Orthology biological process
visual perception Orthology biological process
cell migration Orthology biological process
system development Orthology biological process
extracellular region part Orthology cellular component
structural molecule activity Orthology molecular function
macromolecular complex binding Orthology molecular function
macromolecular complex Orthology cellular component
anion binding Orthology molecular function
carbohydrate derivative binding Orthology molecular function
catabolic process Orthology biological process
animal organ development Orthology biological process
anatomical structure development Orthology biological process
anatomical structure morphogenesis Orthology biological process
cell differentiation Orthology biological process
cell development Orthology biological process
heart development Orthology biological process
protein metabolic process Orthology biological process
biosynthetic process Orthology biological process
wound healing Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
multicellular organism development Orthology biological process
binding Orthology molecular function
cellular component organization Orthology biological process

GO (Orthology)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
skeletal system development Hs biological process
extracellular matrix structural constituent Hs molecular function
protein binding Hs molecular function
collagen binding Hs molecular function
extracellular region Hs cellular component
proteinaceous extracellular matrix Hs cellular component
collagen trimer Hs cellular component
collagen type V trimer Hs cellular component
collagen type XI trimer Hs cellular component
endoplasmic reticulum lumen Hs cellular component
ribosome Hs cellular component
cell-matrix adhesion Hs biological process
sensory perception of sound Hs biological process
heparin binding Hs molecular function
extracellular matrix structural constituent conferring tensile strength Hs molecular function
extracellular matrix organization Hs biological process
collagen fibril organization Hs biological process
collagen catabolic process Hs biological process
protein binding, bridging Hs molecular function
extracellular matrix Hs cellular component
proteoglycan binding Hs molecular function
skin development Hs biological process
metal ion binding Hs molecular function
cartilage development Hs biological process
palate development Hs biological process
soft palate development Hs biological process
extracellular exosome Hs cellular component
cartilage condensation Hs biological process
ossification Hs biological process
blood vessel development Hs biological process
osteoblast differentiation Hs biological process
tissue homeostasis Hs biological process
chondrocyte differentiation Hs biological process
chondrocyte development Hs biological process
heart morphogenesis Hs biological process
integrin binding Hs molecular function
basement membrane Hs cellular component
extracellular space Hs cellular component
proteoglycan metabolic process Hs biological process
cell adhesion Hs biological process
visual perception Hs biological process
cell migration Hs biological process
collagen biosynthetic process Hs biological process
wound healing, spreading of epidermal cells Hs biological process
endodermal cell differentiation Hs biological process
tendon development Hs biological process
inner ear morphogenesis Hs biological process
platelet-derived growth factor binding Hs molecular function
eye morphogenesis Hs biological process
skeletal system morphogenesis Hs biological process
extracellular matrix binding Hs molecular function
detection of mechanical stimulus involved in sensory perception of sound Hs biological process
ventricular cardiac muscle tissue morphogenesis Hs biological process
supramolecular fiber organization Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
extracellular matrix structural constituent Hs molecular function 462 1.17e-135
protein binding Hs molecular function 430 1.84e-124
collagen binding Hs molecular function 462 1.17e-135
extracellular region Hs cellular component 462 1.17e-135
proteinaceous extracellular matrix Hs cellular component 462 1.17e-135
collagen trimer Hs cellular component 462 1.17e-135
collagen type V trimer Hs cellular component 462 1.17e-135
collagen type XI trimer Hs cellular component 430 1.84e-124
endoplasmic reticulum lumen Hs cellular component 462 1.17e-135
ribosome Hs cellular component 411 4.54e-118
heparin binding Hs molecular function 462 1.17e-135
extracellular matrix structural constituent conferring tensile strength Hs molecular function 430 1.84e-124
protein binding, bridging Hs molecular function 430 1.84e-124
extracellular matrix Hs cellular component 462 1.17e-135
proteoglycan binding Hs molecular function 462 1.17e-135
metal ion binding Hs molecular function 430 1.84e-124
extracellular exosome Hs cellular component 462 1.17e-135

GO (InterProScan)

1 result

GO Term Analysis Type e-value
extracellular matrix structural constituent SMART molecular function 1.8E-82

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