Aniseed - Gene card

External Database Gene Card

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WashU Genome Browser

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Genomicus Synteny Browser

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Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
Znf_RanBP2_sf	SUPERFAMILY	Zinc finger, RanBP2-type superfamily
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	Pfam	Helicase, C-terminal
Helicase/UvrB_N	Pfam	Helicase/UvrB, N-terminal
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
Helicase_C	CDD	Helicase, C-terminal
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
FANCM-MHF-bd	Pfam	Fanconi anemia group M protein, MHF binding domain
Helicase_C	SMART	Helicase, C-terminal
Znf_RanBP2	ProSitePatterns	Zinc finger, RanBP2-type
Znf_RanBP2	Pfam	Zinc finger, RanBP2-type
Helicase_C	ProSiteProfiles	Helicase, C-terminal
Znf_RanBP2	ProSiteProfiles	Zinc finger, RanBP2-type
Znf_RanBP2	SMART	Zinc finger, RanBP2-type

GOSlim

32 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
double-stranded DNA binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
DNA repair	Orthology	biological process
cellular response to DNA damage stimulus	Orthology	biological process
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
hydrolase activity	Orthology	molecular function
cell junction	Blast	cellular component
ubiquitin protein ligase binding	Blast	molecular function
identical protein binding	Blast	molecular function
cell projection	Blast	cellular component
metal ion binding	Blast	molecular function
reproductive process	Orthology	biological process
DNA metabolic process	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
DNA replication	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
resolution of meiotic recombination intermediates	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
helicase activity	Hs	molecular function
nuclease activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
DNA repair	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
hydrolase activity	Hs	molecular function
replication fork processing	Hs	biological process
interstrand cross-link repair	Hs	biological process
Fanconi anaemia nuclear complex	Hs	cellular component
FANCM-MHF complex	Hs	cellular component
nucleic acid phosphodiester bond hydrolysis	Hs	biological process

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	753	0.0
nucleic acid binding	Hs	molecular function	753	0.0
DNA binding	Hs	molecular function	753	0.0
chromatin binding	Hs	molecular function	753	0.0
double-stranded DNA binding	Hs	molecular function	67.8	5.59e-11
RNA binding	Hs	molecular function	77.8	4.25e-14
double-stranded RNA binding	Hs	molecular function	77.8	4.25e-14
single-stranded RNA binding	Hs	molecular function	77.8	4.25e-14
helicase activity	Hs	molecular function	753	0.0
nuclease activity	Hs	molecular function	753	0.0
protein binding	Hs	molecular function	753	0.0
ATP binding	Hs	molecular function	753	0.0
nucleus	Hs	cellular component	753	0.0
nucleoplasm	Hs	cellular component	753	0.0
cytoplasm	Hs	cellular component	77.8	4.25e-14
cytosol	Hs	cellular component	67.8	5.59e-11
cytoskeleton	Hs	cellular component	67.8	5.59e-11
plasma membrane	Hs	cellular component	67.8	5.59e-11
bicellular tight junction	Hs	cellular component	67.8	5.59e-11
zinc ion binding	Hs	molecular function	77.8	4.25e-14
actin cytoskeleton	Hs	cellular component	67.8	5.59e-11
membrane	Hs	cellular component	67.8	5.59e-11
hydrolase activity	Hs	molecular function	753	0.0
cell junction	Hs	cellular component	67.8	5.59e-11
ubiquitin protein ligase binding	Hs	molecular function	67.8	5.59e-11
ruffle membrane	Hs	cellular component	67.8	5.59e-11
identical protein binding	Hs	molecular function	67.8	5.59e-11
cell projection	Hs	cellular component	67.8	5.59e-11
Fanconi anaemia nuclear complex	Hs	cellular component	753	0.0
metal ion binding	Hs	molecular function	77.8	4.25e-14
FANCM-MHF complex	Hs	cellular component	753	0.0

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	Pfam	molecular function	3.3E-20
ATP binding	Pfam	molecular function	3.3E-20
hydrolase activity	Pfam	molecular function	3.3E-20

Gene Card

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