Aniseed - Gene card

Gene Card

Best human hits

ZNF235; ZNF28; ZNF83

Species

H.roretzi

Unique Gene ID

Harore.g00015401

Gene Model ID

Harore.CG.MTP2014.S331.g15401

Location

S331:34017..34920

Transcript Models and Sequences

Harore.CG.MTP2014.S331.g15401.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type

GOSlim

15 results

GO Term	Annotation Origin	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
zinc ion binding	Orthology	molecular function
anatomical structure morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
nucleoplasm	Hs	cellular component
zinc ion binding	Hs	molecular function
odontogenesis	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	169	3.07e-48
nucleic acid binding	Hs	molecular function	173	9.79e-50
DNA binding	Hs	molecular function	173	9.79e-50
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	173	9.79e-50
protein binding	Hs	molecular function	165	6.37e-48
intracellular	Hs	cellular component	173	9.79e-50
nucleus	Hs	cellular component	173	9.79e-50
metal ion binding	Hs	molecular function	173	9.79e-50

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	4.3E-4