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GENE CARD

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Gene Card

Best human hits

DNA2; IGHMBP2; UPF1

Species

H.roretzi

Unique Gene ID

Harore.g00015120

Gene Model ID

Harore.CG.MTP2014.S342.g15120

Location

S342:31942..41064

Transcript Models and Sequences

  Harore.CG.MTP2014.S342.g15120.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
DNA_replication_fac_Dna2_N Pfam DNA replication factor Dna2, N-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Dna2 PANTHER Dna2

GOSlim

37 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
RNA binding Blast molecular function
catalytic activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
cytosol Blast cellular component
DNA replication InterProScan biological process
transcription factor binding Blast molecular function
zinc ion binding Blast molecular function
membrane Blast cellular component
hydrolase activity Blast molecular function
axon Blast cellular component
cell projection Blast cellular component
metal ion binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic part Blast cellular component
macromolecular complex Blast cellular component
organelle organization Blast biological process
nucleoside-triphosphatase activity Blast molecular function
mitochondrial matrix Blast cellular component
DNA metabolic process Blast biological process
cell projection part Blast cellular component
nuclear part Blast cellular component
sequence-specific DNA binding Blast molecular function
macromolecular complex binding Blast molecular function
cofactor binding Blast molecular function
RNA catabolic process InterProScan biological process
RNA biosynthetic process InterProScan biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 162 1.91e-40
nucleotide binding Hs molecular function 721 0.0
nuclear chromosome, telomeric region Hs cellular component 721 0.0
chromatin Hs cellular component 163 2.17e-40
P-body Hs cellular component 163 2.17e-40
nucleic acid binding Hs molecular function 162 1.91e-40
DNA binding Hs molecular function 721 0.0
DNA helicase activity Hs molecular function 721 0.0
chromatin binding Hs molecular function 163 2.17e-40
single-stranded DNA binding Hs molecular function 162 1.91e-40
RNA binding Hs molecular function 163 2.17e-40
catalytic activity Hs molecular function 721 0.0
ATP-dependent RNA helicase activity Hs molecular function 163 2.17e-40
helicase activity Hs molecular function 721 0.0
nuclease activity Hs molecular function 721 0.0
endonuclease activity Hs molecular function 721 0.0
protein binding Hs molecular function 721 0.0
ATP binding Hs molecular function 721 0.0
nucleus Hs cellular component 721 0.0
nucleoplasm Hs cellular component 721 0.0
cytoplasm Hs cellular component 163 2.17e-40
mitochondrion Hs cellular component 721 0.0
gamma DNA polymerase complex Hs cellular component 721 0.0
cytosol Hs cellular component 163 2.17e-40
DNA-dependent ATPase activity Hs molecular function 162 1.91e-40
transcription factor binding Hs molecular function 162 1.91e-40
RNA-dependent ATPase activity Hs molecular function 162 1.91e-40
zinc ion binding Hs molecular function 163 2.17e-40
membrane Hs cellular component 162 1.91e-40
hydrolase activity Hs molecular function 721 0.0
ATPase activity Hs molecular function 721 0.0
site-specific endodeoxyribonuclease activity, specific for altered base Hs molecular function 721 0.0
5'-flap endonuclease activity Hs molecular function 721 0.0
axon Hs cellular component 162 1.91e-40
growth cone Hs cellular component 162 1.91e-40
intracellular ribonucleoprotein complex Hs cellular component 162 1.91e-40
ATP-dependent 5'-3' RNA helicase activity Hs molecular function 162 1.91e-40
exon-exon junction complex Hs cellular component 163 2.17e-40
telomeric DNA binding Hs molecular function 163 2.17e-40
mitochondrial nucleoid Hs cellular component 721 0.0
cell projection Hs cellular component 162 1.91e-40
ribosome binding Hs molecular function 162 1.91e-40
5'-3' DNA helicase activity Hs molecular function 721 0.0
ATP-dependent 5'-3' DNA helicase activity Hs molecular function 162 1.91e-40
single-stranded DNA-dependent ATPase activity Hs molecular function 721 0.0
supraspliceosomal complex Hs cellular component 163 2.17e-40
metal ion binding Hs molecular function 721 0.0
iron-sulfur cluster binding Hs molecular function 721 0.0
4 iron, 4 sulfur cluster binding Hs molecular function 721 0.0

GO (InterProScan)

3 results

GO Term Analysis Type e-value
5'-flap endonuclease activity PANTHER molecular function 2.2E-190
DNA replication, Okazaki fragment processing PANTHER biological process 2.2E-190
single-stranded DNA-dependent ATPase activity PANTHER molecular function 2.2E-190

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