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GENE CARD

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Gene Card

Best human hits

TUBB; TUBB2B; TUBB4B

Species

H.roretzi

Unique Gene ID

Harore.g00005771

Gene Model ID

Harore.CG.MTP2014.S35.g05771

Location

S35:418924..420578

Transcript Models and Sequences

  Harore.CG.MTP2014.S35.g05771.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Beta_tubulin PANTHER Beta tubulin
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin PANTHER Tubulin
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin PRINTS Tubulin
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin_C Gene3D Tubulin, C-terminal
Beta-tubulin_BS ProSitePatterns Beta tubulin, autoregulation binding site
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Beta_tubulin PRINTS Beta tubulin
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal

GOSlim

32 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
GTPase activity Blast molecular function
structural molecule activity Blast molecular function
protein binding Blast molecular function
GTP binding Blast molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
microtubule-based process InterProScan biological process
microtubule cytoskeleton Blast cellular component
ubiquitin protein ligase binding Blast molecular function
myelin sheath Blast cellular component
cell body Blast cellular component
protein heterodimerization activity Blast molecular function
unfolded protein binding Blast molecular function
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
RNA binding Blast molecular function
organelle organization Blast biological process
nuclear envelope Blast cellular component
intracellular organelle lumen Blast cellular component
cytoplasmic vesicle Blast cellular component
lysosome Blast cellular component
vacuolar part Blast cellular component
endomembrane system Blast cellular component
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
receptor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 852 0.0
double-stranded RNA binding Hs molecular function 852 0.0
GTPase activity Hs molecular function 852 0.0
structural molecule activity Hs molecular function 847 0.0
structural constituent of cytoskeleton Hs molecular function 852 0.0
protein binding Hs molecular function 852 0.0
GTP binding Hs molecular function 852 0.0
extracellular region Hs cellular component 852 0.0
nucleus Hs cellular component 852 0.0
nuclear envelope lumen Hs cellular component 847 0.0
cytoplasm Hs cellular component 852 0.0
cytosol Hs cellular component 852 0.0
cytoskeleton Hs cellular component 852 0.0
microtubule Hs cellular component 852 0.0
microtubule cytoskeleton Hs cellular component 852 0.0
ubiquitin protein ligase binding Hs molecular function 847 0.0
azurophil granule lumen Hs cellular component 852 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 847 0.0
MHC class I protein binding Hs molecular function 852 0.0
myelin sheath Hs cellular component 852 0.0
cell body Hs cellular component 847 0.0
protein heterodimerization activity Hs molecular function 852 0.0
unfolded protein binding Hs molecular function 852 0.0
extracellular exosome Hs cellular component 852 0.0
extracellular vesicle Hs cellular component 852 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 1.7E-70
structural constituent of cytoskeleton PANTHER molecular function 0.0
GTP binding PANTHER molecular function 0.0
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0

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