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GENE CARD

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Gene Card

Best human hits

DDX58; DHX58; IFIH1

Species

H.roretzi

Unique Gene ID

Harore.g00011454

Gene Model ID

Harore.CG.MTP2014.S358.g11454

Location

S358:30976..39631

Transcript Models and Sequences

  Harore.CG.MTP2014.S358.g11454.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
Ser/Thr_kinase_AS ProSitePatterns Serine/threonine-protein kinase, active site
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase/UvrB_N Pfam Helicase/UvrB, N-terminal
KEN_sf Gene3D KEN domain superfamily
Kinase-like_dom_sf SUPERFAMILY Protein kinase-like domain superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RLR_CTR ProSiteProfiles RIG-I-like receptor, C-terminal regulatory domain
Helicase_C Pfam Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
Prot_kinase_dom ProSiteProfiles Protein kinase domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Prot_kinase_dom Pfam Protein kinase domain
Helicase_C ProSiteProfiles Helicase, C-terminal
RLR_C_sf Gene3D RIG-I-like receptor, C-terminal domain superfamily
Prot_kinase_dom SMART Protein kinase domain
RLR_CTR Pfam RIG-I-like receptor, C-terminal regulatory domain

GOSlim

26 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
double-stranded DNA binding Blast molecular function
RNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
zinc ion binding Blast molecular function
membrane Blast cellular component
hydrolase activity Blast molecular function
cell junction Blast cellular component
ubiquitin protein ligase binding Blast molecular function
identical protein binding Blast molecular function
cell projection Blast cellular component
metal ion binding Blast molecular function
protein kinase activity InterProScan molecular function
protein phosphorylation InterProScan biological process
nucleoside-triphosphatase activity Blast molecular function
cell projection membrane Blast cellular component
cell leading edge Blast cellular component
macromolecular complex binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 278 5.95e-79
nucleic acid binding Hs molecular function 278 5.95e-79
DNA binding Hs molecular function 224 3.64e-62
double-stranded DNA binding Hs molecular function 278 5.95e-79
RNA binding Hs molecular function 278 5.95e-79
double-stranded RNA binding Hs molecular function 278 5.95e-79
single-stranded RNA binding Hs molecular function 278 5.95e-79
helicase activity Hs molecular function 278 5.95e-79
protein binding Hs molecular function 278 5.95e-79
ATP binding Hs molecular function 278 5.95e-79
nucleus Hs cellular component 213 1.21e-56
cytoplasm Hs cellular component 278 5.95e-79
cytosol Hs cellular component 278 5.95e-79
cytoskeleton Hs cellular component 278 5.95e-79
plasma membrane Hs cellular component 278 5.95e-79
bicellular tight junction Hs cellular component 278 5.95e-79
zinc ion binding Hs molecular function 278 5.95e-79
actin cytoskeleton Hs cellular component 278 5.95e-79
membrane Hs cellular component 278 5.95e-79
hydrolase activity Hs molecular function 278 5.95e-79
cell junction Hs cellular component 278 5.95e-79
ubiquitin protein ligase binding Hs molecular function 278 5.95e-79
ruffle membrane Hs cellular component 278 5.95e-79
identical protein binding Hs molecular function 278 5.95e-79
cell projection Hs cellular component 278 5.95e-79
ribonucleoprotein complex binding Hs molecular function 213 1.21e-56
metal ion binding Hs molecular function 278 5.95e-79

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 2.9E-18
ATP binding Pfam molecular function 1.0E-43
hydrolase activity Pfam molecular function 2.9E-18
protein kinase activity Pfam molecular function 1.0E-43
protein phosphorylation Pfam biological process 1.0E-43

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