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GENE CARD

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Gene Card

Best human hits

H2AFX; HIST1H2AH; HIST1H2AJ

Species

H.roretzi

Unique Gene ID

Harore.g00013551

Gene Model ID

Harore.CG.MTP2014.S361.g13551

Location

S361:70333..72430

Transcript Models and Sequences

  Harore.CG.MTP2014.S361.g13551.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Histone_H2A/H2B/H3 Pfam Histone H2A/H2B/H3
Histone-fold SUPERFAMILY Histone-fold
Histone_H2A SMART Histone H2A
Histone-fold Gene3D Histone-fold
Histone_H2A CDD Histone H2A
Histone_H2A_CS ProSitePatterns Histone H2A conserved site
Histone_H2A PRINTS Histone H2A

GOSlim

13 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
centrosome Blast cellular component
nuclear speck Blast cellular component
enzyme binding Blast molecular function
protein heterodimerization activity Blast molecular function
extracellular exosome Blast cellular component
intracellular organelle part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
nuclear lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, telomeric region Hs cellular component 177 9.20e-58
chromatin Hs cellular component 177 9.20e-58
nucleosome Hs cellular component 177 9.20e-58
nuclear chromatin Hs cellular component 177 9.20e-58
condensed nuclear chromosome Hs cellular component 177 9.20e-58
male germ cell nucleus Hs cellular component 177 9.20e-58
XY body Hs cellular component 177 9.20e-58
DNA binding Hs molecular function 177 9.20e-58
damaged DNA binding Hs molecular function 177 9.20e-58
protein binding Hs molecular function 177 9.20e-58
nucleus Hs cellular component 177 9.20e-58
nucleoplasm Hs cellular component 177 9.20e-58
replication fork Hs cellular component 177 9.20e-58
chromosome Hs cellular component 177 9.20e-58
centrosome Hs cellular component 177 9.20e-58
nuclear speck Hs cellular component 177 9.20e-58
enzyme binding Hs molecular function 177 9.20e-58
site of double-strand break Hs cellular component 177 9.20e-58
histone binding Hs molecular function 177 9.20e-58
protein heterodimerization activity Hs molecular function 177 9.20e-58
extracellular exosome Hs cellular component 177 9.20e-58

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleosome SMART cellular component 1.1E-59
DNA binding SMART molecular function 1.1E-59
nucleus SMART cellular component 1.1E-59
protein heterodimerization activity Gene3D molecular function 4.4E-51