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GENE CARD

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Gene Card

Best human hits

GPSM2; RAPSN; TTC28

Species

H.roretzi

Unique Gene ID

Harore.g00013525

Gene Model ID

Harore.CG.MTP2014.S37.g13525

Location

S37:377535..383814

Transcript Models and Sequences

  Harore.CG.MTP2014.S37.g13525.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
TPR_repeat ProSiteProfiles Tetratricopeptide repeat
TPR-like_helical_dom_sf SUPERFAMILY Tetratricopeptide-like helical domain superfamily
Znf_RING Pfam Zinc finger, RING-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_RING SMART Zinc finger, RING-type
Rapsyn_myristoylation/link_N Pfam Rapsyn, myristoylation/linker region, N-terminal
TPR-contain_dom ProSiteProfiles Tetratricopeptide repeat-containing domain
TPR_repeat SMART Tetratricopeptide repeat
TPR_repeat Pfam Tetratricopeptide repeat
TPR-like_helical_dom_sf Gene3D Tetratricopeptide-like helical domain superfamily

GOSlim

35 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
chemical synaptic transmission Orthology biological process
protein C-terminus binding Blast molecular function
membrane Orthology cellular component
kinase binding Blast molecular function
cell junction Orthology cellular component
midbody Blast cellular component
GTPase regulator activity Blast molecular function
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
synapse Orthology cellular component
postsynaptic membrane Orthology cellular component
metal ion binding Orthology molecular function
receptor binding Orthology molecular function
positive regulation of apoptotic process Orthology biological process
protein localization to membrane Orthology biological process
membrane organization Orthology biological process
organelle part Orthology cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component
guanyl ribonucleotide binding Blast molecular function
anion binding Blast molecular function
purine ribonucleoside binding Blast molecular function
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane part Blast cellular component
macromolecular complex binding Blast molecular function

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
centrosome Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
chemical synaptic transmission Hs biological process
synaptic transmission, cholinergic Hs biological process
membrane Hs cellular component
cell junction Hs cellular component
neuromuscular junction Hs cellular component
acetylcholine receptor binding Hs molecular function
ionotropic glutamate receptor binding Hs molecular function
protein membrane anchor Hs molecular function
positive regulation of neuron apoptotic process Hs biological process
synapse Hs cellular component
postsynaptic membrane Hs cellular component
metal ion binding Hs molecular function
skeletal muscle acetylcholine-gated channel clustering Hs biological process
postsynaptic specialization membrane Hs cellular component

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 57.4 9.70e-09
spindle pole Hs cellular component 57.4 9.70e-09
G-protein alpha-subunit binding Hs molecular function 57.4 9.70e-09
GDP-dissociation inhibitor activity Hs molecular function 57.4 9.70e-09
protein binding Hs molecular function 298 3.25e-97
cytoplasm Hs cellular component 298 3.25e-97
Golgi apparatus Hs cellular component 298 3.25e-97
centrosome Hs cellular component 298 3.25e-97
microtubule organizing center Hs cellular component 48.5 7.64e-06
spindle Hs cellular component 48.5 7.64e-06
cytosol Hs cellular component 298 3.25e-97
cytoskeleton Hs cellular component 298 3.25e-97
plasma membrane Hs cellular component 298 3.25e-97
cell cortex Hs cellular component 57.4 9.70e-09
protein C-terminus binding Hs molecular function 57.4 9.70e-09
membrane Hs cellular component 298 3.25e-97
lateral plasma membrane Hs cellular component 57.4 9.70e-09
kinase binding Hs molecular function 48.5 7.64e-06
protein domain specific binding Hs molecular function 57.4 9.70e-09
cell junction Hs cellular component 298 3.25e-97
midbody Hs cellular component 48.5 7.64e-06
GTPase regulator activity Hs molecular function 57.4 9.70e-09
neuromuscular junction Hs cellular component 298 3.25e-97
macromolecular complex Hs cellular component 57.4 9.70e-09
acetylcholine receptor binding Hs molecular function 298 3.25e-97
ionotropic glutamate receptor binding Hs molecular function 298 3.25e-97
identical protein binding Hs molecular function 57.4 9.70e-09
protein membrane anchor Hs molecular function 298 3.25e-97
protein self-association Hs molecular function 57.4 9.70e-09
synapse Hs cellular component 298 3.25e-97
postsynaptic membrane Hs cellular component 298 3.25e-97
metal ion binding Hs molecular function 298 3.25e-97
dynein complex binding Hs molecular function 57.4 9.70e-09
mitotic spindle pole Hs cellular component 57.4 9.70e-09
lateral cell cortex Hs cellular component 57.4 9.70e-09
postsynaptic specialization membrane Hs cellular component 298 3.25e-97
cell cortex region Hs cellular component 57.4 9.70e-09

GO (InterProScan)

4 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 2.4E-17
chemical synaptic transmission Pfam biological process 2.1E-7
acetylcholine receptor binding Pfam molecular function 2.1E-7
protein membrane anchor Pfam molecular function 2.1E-7