Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

17 results

IPR Term	Analysis	Definition
cNMP-bd_dom	ProSiteProfiles	Cyclic nucleotide-binding domain
cNMP-bd_dom	CDD	Cyclic nucleotide-binding domain
STKc_cGK	CDD	cGMP-dependent protein kinase, catalytic domain
cNMP-bd_dom	Pfam	Cyclic nucleotide-binding domain
AGC-kinase_C	ProSiteProfiles	AGC-kinase, C-terminal
Prot_kinase_dom	Pfam	Protein kinase domain
Ser/Thr_kinase_AS	ProSitePatterns	Serine/threonine-protein kinase, active site
cNMP-bd-like	SUPERFAMILY	Cyclic nucleotide-binding-like
cNMP-bd_CS	ProSitePatterns	Cyclic nucleotide-binding, conserved site
Prot_kinase_dom	SMART	Protein kinase domain
Protein_kinase_ATP_BS	ProSitePatterns	Protein kinase, ATP binding site
Prot_kinase_dom	ProSiteProfiles	Protein kinase domain
cGMP_dep_kinase	PRINTS	cGMP-dependent kinase
RmlC-like_jellyroll	Gene3D	RmlC-like jelly roll fold
cNMP-bd_dom	SMART	Cyclic nucleotide-binding domain
AGC-kinase_C	SMART	AGC-kinase, C-terminal
Kinase-like_dom_sf	SUPERFAMILY	Protein kinase-like domain superfamily

GOSlim

33 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
protein kinase activity	Orthology	molecular function
protein serine/threonine kinase activity	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
protein phosphorylation	Orthology	biological process
signal transduction	Orthology	biological process
metabolic process	Orthology	biological process
membrane	Blast	cellular component
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
apical plasma membrane	Blast	cellular component
transferase activity	Orthology	molecular function
nuclear membrane	Blast	cellular component
protein homodimerization activity	Blast	molecular function
regulation of GTPase activity	Orthology	biological process
cell migration	Orthology	biological process
generation of neurons	Orthology	biological process
molecular transducer activity	Orthology	molecular function
molecular function regulator	Orthology	molecular function
transmembrane transport	Orthology	biological process
neuron projection development	Orthology	biological process
intracellular signal transduction	Orthology	biological process
organelle organization	Orthology	biological process
anion binding	Orthology	molecular function
guanyl ribonucleotide binding	Orthology	molecular function
brain development	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
neuron migration	Hs	biological process
catalytic activity	Hs	molecular function
protein kinase activity	Hs	molecular function
protein serine/threonine kinase activity	Hs	molecular function
cGMP-dependent protein kinase activity	Hs	molecular function
calcium channel regulator activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
protein phosphorylation	Hs	biological process
signal transduction	Hs	biological process
metabolic process	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
dendrite development	Hs	biological process
transferase activity	Hs	molecular function
cGMP-mediated signaling	Hs	biological process
actin cytoskeleton organization	Hs	biological process
cGMP binding	Hs	molecular function
forebrain development	Hs	biological process
regulation of GTPase activity	Hs	biological process
negative regulation of smooth muscle contraction	Hs	biological process

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	890	0.0
catalytic activity	Hs	molecular function	890	0.0
protein kinase activity	Hs	molecular function	890	0.0
protein serine/threonine kinase activity	Hs	molecular function	890	0.0
cAMP-dependent protein kinase activity	Hs	molecular function	296	1.32e-90
cGMP-dependent protein kinase activity	Hs	molecular function	890	0.0
calcium channel regulator activity	Hs	molecular function	890	0.0
protein binding	Hs	molecular function	890	0.0
ATP binding	Hs	molecular function	890	0.0
nucleus	Hs	cellular component	296	1.32e-90
cytoplasm	Hs	cellular component	890	0.0
Golgi apparatus	Hs	cellular component	890	0.0
cytosol	Hs	cellular component	890	0.0
plasma membrane	Hs	cellular component	890	0.0
membrane	Hs	cellular component	639	0.0
kinase activity	Hs	molecular function	890	0.0
apical plasma membrane	Hs	cellular component	639	0.0
transferase activity	Hs	molecular function	890	0.0
cGMP binding	Hs	molecular function	890	0.0
nuclear membrane	Hs	cellular component	639	0.0
protein homodimerization activity	Hs	molecular function	639	0.0

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
protein kinase activity	SMART	molecular function	1.0E-87
protein serine/threonine kinase activity	SMART	molecular function	4.9E-12
cGMP-dependent protein kinase activity	CDD	molecular function	1.19053E-175
ATP binding	SMART	molecular function	1.0E-87
protein phosphorylation	SMART	biological process	1.0E-87

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location