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GENE CARD

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Gene Card

Best human hits

BRIX1; IMP4; RPF2

Species

H.roretzi

Unique Gene ID

Harore.g00016040

Gene Model ID

Harore.CG.MTP2014.S419.g16040

Location

S419:19671..21763

Transcript Models and Sequences

  Harore.CG.MTP2014.S419.g16040.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Brix ProSiteProfiles Brix domain
Brix Pfam Brix domain
Brix SMART Brix domain
BRX1 PANTHER Ribosome biogenesis protein BRX1

GOSlim

6 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Blast molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Orthology cellular component
macromolecular complex Blast cellular component

GO (Orthology)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ribosomal large subunit assembly Hs biological process
RNA binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
ribosome biogenesis Hs biological process

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibrillar center Hs cellular component 43.1 1.07e-04
RNA binding Hs molecular function 344 1.86e-118
protein binding Hs molecular function 43.1 1.07e-04
nucleus Hs cellular component 344 1.86e-118
nucleoplasm Hs cellular component 43.1 1.07e-04
nucleolus Hs cellular component 344 1.86e-118
5S rRNA binding Hs molecular function 55.5 9.67e-09
rRNA binding Hs molecular function 55.5 9.67e-09
snoRNA binding Hs molecular function 43.1 1.07e-04
intracellular ribonucleoprotein complex Hs cellular component 43.1 1.07e-04
small-subunit processome Hs cellular component 43.1 1.07e-04
Mpp10 complex Hs cellular component 43.1 1.07e-04
rRNA primary transcript binding Hs molecular function 43.1 1.07e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value