Aniseed - Gene card

Gene Card

Best human hits

ITGB1; ITGB2; ITGB3

Species

H.roretzi

Unique Gene ID

Harore.g00010299

Gene Model ID

Harore.CG.MTP2014.S44.g10299

Location

S44:334274..342184

Transcript Models and Sequences

Harore.CG.MTP2014.S44.g10299.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term	Analysis	Definition
vWFA_dom_sf	Gene3D	von Willebrand factor A-like domain superfamily
Integrin_bsu_tail_dom_sf	SUPERFAMILY	Integrin beta tail domain superfamily
Integrin_bsu	PRINTS	Integrin beta subunit
Integrin_bsu_cyt_dom	Pfam	Integrin beta subunit, cytoplasmic domain
Integrin_bsu	PANTHER	Integrin beta subunit
Integrin_bsu_VWA	SMART	Integrin beta subunit, VWA domain
Integrin_bsu	ProSitePatterns	Integrin beta subunit
Integrin_bsu_VWA	Pfam	Integrin beta subunit, VWA domain
Integrin_bsu	PIRSF	Integrin beta subunit
Integrin_dom_sf	SUPERFAMILY	Integrin domain superfamily
vWFA_dom_sf	SUPERFAMILY	von Willebrand factor A-like domain superfamily
Integrin_bsu_tail	SMART	Integrin beta subunit, tail

GOSlim

94 results

GO Term	Annotation Origin	Type
G1/S transition of mitotic cell cycle	Orthology	biological process
actin binding	Orthology	molecular function
integrin binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
endosome	Orthology	cellular component
plasma membrane	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
apoptotic process	Orthology	biological process
cell adhesion	Orthology	biological process
cell-cell signaling	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
cell surface	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cell migration	Orthology	biological process
cytokine-mediated signaling pathway	Orthology	biological process
enzyme binding	Orthology	molecular function
protein kinase binding	Orthology	molecular function
lamellipodium	Orthology	cellular component
cell junction	Orthology	cellular component
extracellular matrix organization	Orthology	biological process
neuron projection development	Orthology	biological process
cytoplasmic vesicle	Orthology	cellular component
melanosome	Orthology	cellular component
identical protein binding	Blast	molecular function
cell projection	Orthology	cellular component
positive regulation of apoptotic process	Orthology	biological process
positive regulation of GTPase activity	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
membrane raft	Orthology	cellular component
synapse	Orthology	cellular component
metal ion binding	Orthology	molecular function
protein heterodimerization activity	Orthology	molecular function
perinuclear region of cytoplasm	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
synaptic membrane	Orthology	cellular component
extracellular vesicle	Orthology	cellular component
binding	Orthology	molecular function
cell differentiation	Orthology	biological process
plasma membrane region	Orthology	cellular component
cell leading edge	Orthology	cellular component
angiogenesis	Orthology	biological process
immune system process	Orthology	biological process
defense response	Orthology	biological process
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
developmental process	Orthology	biological process
macromolecular complex	Orthology	cellular component
gamete generation	Orthology	biological process
cell morphogenesis	Orthology	biological process
nervous system process	Orthology	biological process
plasma membrane part	Orthology	cellular component
signaling receptor activity	Orthology	molecular function
brain development	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cytoskeletal part	Orthology	cellular component
animal organ development	Orthology	biological process
transmembrane signaling receptor activity	Orthology	molecular function
chemotaxis	Orthology	biological process
cell projection membrane	Orthology	cellular component
signal transduction	Orthology	biological process
innate immune response	Orthology	biological process
small GTPase mediated signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
whole membrane	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
endomembrane system	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
myelin sheath	Orthology	cellular component
anatomical structure formation involved in morphogenesis	Orthology	biological process
multicellular organism development	Orthology	biological process
protein localization to membrane	Orthology	biological process
postsynapse	Orthology	cellular component
cell development	Orthology	biological process
axonogenesis	Orthology	biological process
heart development	Orthology	biological process
cell morphogenesis involved in neuron differentiation	Orthology	biological process
neuron projection morphogenesis	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
protein phosphorylation	Orthology	biological process
immune response	Orthology	biological process
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
cell cycle	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
cytoplasmic part	Orthology	cellular component
regulation of signal transduction	Orthology	biological process
catalytic activity	Blast	molecular function
receptor binding	Blast	molecular function

GO (Orthology)

128 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G1/S transition of mitotic cell cycle	Hs	biological process
amyloid-beta binding	Hs	molecular function
virus receptor activity	Hs	molecular function
cell fate specification	Hs	biological process
ruffle	Hs	cellular component
complement component C3b binding	Hs	molecular function
fibronectin binding	Hs	molecular function
protease binding	Hs	molecular function
cell migration involved in sprouting angiogenesis	Hs	biological process
leukocyte migration involved in inflammatory response	Hs	biological process
actin binding	Hs	molecular function
receptor activity	Hs	molecular function
integrin binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
phagocytosis	Hs	biological process
phagocytosis, engulfment	Hs	biological process
apoptotic process	Hs	biological process
inflammatory response	Hs	biological process
cellular defense response	Hs	biological process
cell adhesion	Hs	biological process
homophilic cell adhesion via plasma membrane adhesion molecules	Hs	biological process
cell-matrix adhesion	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
cell-cell signaling	Hs	biological process
aging	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
integrin complex	Hs	cellular component
germ cell migration	Hs	biological process
regulation of cell shape	Hs	biological process
visual learning	Hs	biological process
external side of plasma membrane	Hs	cellular component
cell surface	Hs	cellular component
intercalated disc	Hs	cellular component
coreceptor activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
viral process	Hs	biological process
cell migration	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
protein kinase binding	Hs	molecular function
C-X3-C chemokine binding	Hs	molecular function
formation of radial glial scaffolds	Hs	biological process
lamellipodium	Hs	cellular component
cell junction	Hs	cellular component
filopodium	Hs	cellular component
B cell differentiation	Hs	biological process
extracellular matrix organization	Hs	biological process
ICAM-3 receptor activity	Hs	molecular function
neutrophil chemotaxis	Hs	biological process
heat shock protein binding	Hs	molecular function
neuron projection development	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
cell-substrate adhesion	Hs	biological process
neuromuscular junction	Hs	cellular component
receptor internalization	Hs	biological process
cleavage furrow	Hs	cellular component
ruffle membrane	Hs	cellular component
cell adhesion mediated by integrin	Hs	biological process
cell-cell adhesion mediated by integrin	Hs	biological process
toll-like receptor 4 signaling pathway	Hs	biological process
substrate adhesion-dependent cell spreading	Hs	biological process
integrin alpha1-beta1 complex	Hs	cellular component
integrin alpha2-beta1 complex	Hs	cellular component
integrin alpha3-beta1 complex	Hs	cellular component
integrin alpha7-beta1 complex	Hs	cellular component
integrin alpha8-beta1 complex	Hs	cellular component
integrin alpha10-beta1 complex	Hs	cellular component
integrin alpha11-beta1 complex	Hs	cellular component
integrin alphaL-beta2 complex	Hs	cellular component
integrin alphaM-beta2 complex	Hs	cellular component
negative regulation of Rho protein signal transduction	Hs	biological process
specific granule membrane	Hs	cellular component
myelin sheath abaxonal region	Hs	cellular component
endodermal cell differentiation	Hs	biological process
sarcolemma	Hs	cellular component
melanosome	Hs	cellular component
cell projection	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
receptor clustering	Hs	biological process
dendritic spine	Hs	cellular component
receptor complex	Hs	cellular component
laminin binding	Hs	molecular function
endothelial cell migration	Hs	biological process
positive regulation of GTPase activity	Hs	biological process
plasma membrane raft	Hs	cellular component
macromolecular complex binding	Hs	molecular function
membrane raft	Hs	cellular component
synapse	Hs	cellular component
sarcomere organization	Hs	biological process
cadherin binding	Hs	molecular function
positive regulation of nitric oxide biosynthetic process	Hs	biological process
negative regulation of cell differentiation	Hs	biological process
positive regulation of angiogenesis	Hs	biological process
viral entry into host cell	Hs	biological process
metal ion binding	Hs	molecular function
protein heterodimerization activity	Hs	molecular function
mesodermal cell differentiation	Hs	biological process
perinuclear region of cytoplasm	Hs	cellular component
axon extension	Hs	biological process
cardiac muscle tissue development	Hs	biological process
dendrite morphogenesis	Hs	biological process
regulation of peptidyl-tyrosine phosphorylation	Hs	biological process
regulation of immune response	Hs	biological process
cell adhesion molecule binding	Hs	molecular function
leukocyte migration	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
regulation of cell cycle	Hs	biological process
positive regulation of protein kinase B signaling	Hs	biological process
cardiac muscle cell differentiation	Hs	biological process
recycling endosome	Hs	cellular component
extracellular exosome	Hs	cellular component
tertiary granule membrane	Hs	cellular component
invadopodium membrane	Hs	cellular component
basement membrane organization	Hs	biological process
synaptic membrane	Hs	cellular component
cell-cell adhesion	Hs	biological process
collagen binding involved in cell-matrix adhesion	Hs	molecular function
cytoplasmic region	Hs	cellular component
ficolin-1-rich granule membrane	Hs	cellular component
positive regulation of protein localization to plasma membrane	Hs	biological process
extracellular vesicle	Hs	cellular component
neutrophil migration	Hs	biological process
positive regulation of receptor activity	Hs	biological process
integrin alpha4-beta7 complex	Hs	cellular component

GO (Blast)

87 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
amyloid-beta binding	Hs	molecular function	495	1.12e-163
virus receptor activity	Hs	molecular function	530	1.07e-176
ruffle	Hs	cellular component	530	1.07e-176
complement component C3b binding	Hs	molecular function	495	1.12e-163
fibronectin binding	Hs	molecular function	530	1.07e-176
protease binding	Hs	molecular function	530	1.07e-176
protein disulfide isomerase activity	Hs	molecular function	494	6.80e-163
actin binding	Hs	molecular function	530	1.07e-176
receptor activity	Hs	molecular function	530	1.07e-176
platelet-derived growth factor receptor binding	Hs	molecular function	494	6.80e-163
integrin binding	Hs	molecular function	530	1.07e-176
protein binding	Hs	molecular function	530	1.07e-176
nucleus	Hs	cellular component	494	6.80e-163
cytoplasm	Hs	cellular component	530	1.07e-176
endosome	Hs	cellular component	530	1.07e-176
plasma membrane	Hs	cellular component	530	1.07e-176
integral component of plasma membrane	Hs	cellular component	494	6.80e-163
focal adhesion	Hs	cellular component	530	1.07e-176
integrin complex	Hs	cellular component	530	1.07e-176
external side of plasma membrane	Hs	cellular component	530	1.07e-176
cell surface	Hs	cellular component	530	1.07e-176
intercalated disc	Hs	cellular component	530	1.07e-176
coreceptor activity	Hs	molecular function	530	1.07e-176
membrane	Hs	cellular component	530	1.07e-176
integral component of membrane	Hs	cellular component	530	1.07e-176
fibroblast growth factor binding	Hs	molecular function	494	6.80e-163
enzyme binding	Hs	molecular function	494	6.80e-163
protein kinase binding	Hs	molecular function	495	1.12e-163
C-X3-C chemokine binding	Hs	molecular function	530	1.07e-176
lamellipodium	Hs	cellular component	530	1.07e-176
cell junction	Hs	cellular component	530	1.07e-176
filopodium	Hs	cellular component	530	1.07e-176
ICAM-3 receptor activity	Hs	molecular function	495	1.12e-163
heat shock protein binding	Hs	molecular function	495	1.12e-163
platelet alpha granule membrane	Hs	cellular component	494	6.80e-163
lamellipodium membrane	Hs	cellular component	494	6.80e-163
cytoplasmic vesicle	Hs	cellular component	530	1.07e-176
filopodium membrane	Hs	cellular component	494	6.80e-163
microvillus membrane	Hs	cellular component	494	6.80e-163
neuromuscular junction	Hs	cellular component	530	1.07e-176
insulin-like growth factor I binding	Hs	molecular function	494	6.80e-163
cleavage furrow	Hs	cellular component	530	1.07e-176
ruffle membrane	Hs	cellular component	530	1.07e-176
integrin alpha1-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha2-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha3-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha7-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha8-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha10-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alpha11-beta1 complex	Hs	cellular component	530	1.07e-176
integrin alphav-beta3 complex	Hs	cellular component	494	6.80e-163
integrin alphaL-beta2 complex	Hs	cellular component	495	1.12e-163
integrin alphaM-beta2 complex	Hs	cellular component	495	1.12e-163
specific granule membrane	Hs	cellular component	495	1.12e-163
myelin sheath abaxonal region	Hs	cellular component	530	1.07e-176
alphav-beta3 integrin-PKCalpha complex	Hs	cellular component	494	6.80e-163
alphav-beta3 integrin-IGF-1-IGF1R complex	Hs	cellular component	494	6.80e-163
alphav-beta3 integrin-HMGB1 complex	Hs	cellular component	494	6.80e-163
neuregulin binding	Hs	molecular function	494	6.80e-163
sarcolemma	Hs	cellular component	530	1.07e-176
melanosome	Hs	cellular component	530	1.07e-176
identical protein binding	Hs	molecular function	494	6.80e-163
cell projection	Hs	cellular component	530	1.07e-176
vascular endothelial growth factor receptor 2 binding	Hs	molecular function	494	6.80e-163
dendritic spine	Hs	cellular component	530	1.07e-176
receptor complex	Hs	cellular component	530	1.07e-176
laminin binding	Hs	molecular function	530	1.07e-176
plasma membrane raft	Hs	cellular component	495	1.12e-163
macromolecular complex binding	Hs	molecular function	530	1.07e-176
membrane raft	Hs	cellular component	530	1.07e-176
synapse	Hs	cellular component	530	1.07e-176
cadherin binding	Hs	molecular function	530	1.07e-176
metal ion binding	Hs	molecular function	530	1.07e-176
protein heterodimerization activity	Hs	molecular function	530	1.07e-176
perinuclear region of cytoplasm	Hs	cellular component	530	1.07e-176
cell adhesion molecule binding	Hs	molecular function	530	1.07e-176
extracellular matrix binding	Hs	molecular function	494	6.80e-163
recycling endosome	Hs	cellular component	530	1.07e-176
extracellular exosome	Hs	cellular component	530	1.07e-176
tertiary granule membrane	Hs	cellular component	495	1.12e-163
alphav-beta3 integrin-vitronectin complex	Hs	cellular component	494	6.80e-163
invadopodium membrane	Hs	cellular component	530	1.07e-176
synaptic membrane	Hs	cellular component	530	1.07e-176
collagen binding involved in cell-matrix adhesion	Hs	molecular function	530	1.07e-176
cytoplasmic region	Hs	cellular component	495	1.12e-163
ficolin-1-rich granule membrane	Hs	cellular component	495	1.12e-163
extracellular vesicle	Hs	cellular component	495	1.12e-163

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value