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GENE CARD

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Gene Card

Best human hits

COL12A1; MATN2; SELP

Species

H.roretzi

Unique Gene ID

Harore.g00007134

Gene Model ID

Harore.CG.MTP2014.S51.g07134

Location

S51:336313..344812

Transcript Models and Sequences

  Harore.CG.MTP2014.S51.g07134.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily
Sushi_SCR_CCP_dom Pfam Sushi/SCR/CCP domain
Sushi_SCR_CCP_dom SMART Sushi/SCR/CCP domain
VWF_A ProSiteProfiles von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A Pfam von Willebrand factor, type A

GOSlim

26 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
carbohydrate derivative binding Blast molecular function
macromolecular complex Blast cellular component
extracellular region part Blast cellular component
anion binding Blast molecular function
plasma membrane part Blast cellular component
cell surface Blast cellular component
structural molecule activity Blast molecular function
binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component
small molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
lipopolysaccharide binding Hs molecular function 87.8 4.02e-18
calcium ion binding Hs molecular function 87.8 4.02e-18
protein binding Hs molecular function 87.8 4.02e-18
extracellular region Hs cellular component 81.3 6.67e-16
proteinaceous extracellular matrix Hs cellular component 81.3 6.67e-16
collagen trimer Hs cellular component 81.3 6.67e-16
collagen type XII trimer Hs cellular component 81.3 6.67e-16
basement membrane Hs cellular component 75.5 3.65e-14
extracellular space Hs cellular component 87.8 4.02e-18
endoplasmic reticulum lumen Hs cellular component 81.3 6.67e-16
plasma membrane Hs cellular component 87.8 4.02e-18
integral component of plasma membrane Hs cellular component 87.8 4.02e-18
heparin binding Hs molecular function 87.8 4.02e-18
external side of plasma membrane Hs cellular component 87.8 4.02e-18
membrane Hs cellular component 87.8 4.02e-18
integral component of membrane Hs cellular component 87.8 4.02e-18
extracellular matrix structural constituent conferring tensile strength Hs molecular function 81.3 6.67e-16
carbohydrate binding Hs molecular function 87.8 4.02e-18
extracellular matrix Hs cellular component 81.3 6.67e-16
platelet dense granule membrane Hs cellular component 87.8 4.02e-18
platelet alpha granule membrane Hs cellular component 87.8 4.02e-18
sialic acid binding Hs molecular function 87.8 4.02e-18
fucose binding Hs molecular function 87.8 4.02e-18
glycosphingolipid binding Hs molecular function 87.8 4.02e-18
metal ion binding Hs molecular function 87.8 4.02e-18
calcium-dependent protein binding Hs molecular function 87.8 4.02e-18
extracellular exosome Hs cellular component 81.3 6.67e-16
oligosaccharide binding Hs molecular function 87.8 4.02e-18
extracellular vesicle Hs cellular component 81.3 6.67e-16

GO (InterProScan)

No result

GO Term Analysis Type e-value