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GENE CARD

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Gene Card

Best human hits

DES; PRPH; VIM

Species

H.roretzi

Unique Gene ID

Harore.g00009507

Gene Model ID

Harore.CG.MTP2014.S54.g09507

Location

S54:67506..72113

Transcript Models and Sequences

  Harore.CG.MTP2014.S54.g09507.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
IF SMART Intermediate filament protein
IF PANTHER Intermediate filament protein
Keratin_I PRINTS Keratin, type I
Intermediate_filament_CS ProSitePatterns Intermediate filament protein, conserved site
IF Pfam Intermediate filament protein

GOSlim

82 results

GO Term Annotation Origin Type
structural molecule activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
peroxisome Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
protein C-terminus binding Orthology molecular function
cytoskeletal protein binding Orthology molecular function
positive regulation of gene expression Orthology biological process
membrane Orthology cellular component
cytokine-mediated signaling pathway Orthology biological process
cell leading edge Orthology cellular component
identical protein binding Orthology molecular function
cell projection Orthology cellular component
neuron projection Orthology cellular component
extracellular exosome Orthology cellular component
integrin binding Orthology molecular function
extracellular space Orthology cellular component
intracellular Orthology cellular component
nucleoplasm Orthology cellular component
lysosome Orthology cellular component
multicellular organism development Orthology biological process
nervous system development Orthology biological process
microtubule binding Orthology molecular function
response to wounding Orthology biological process
response to organic substance Orthology biological process
kinase binding Orthology molecular function
cell differentiation Orthology biological process
extracellular matrix organization Orthology biological process
axon Orthology cellular component
nuclear membrane Orthology cellular component
locomotion Orthology biological process
myelin sheath Orthology cellular component
cell body Orthology cellular component
protein heterodimerization activity Orthology molecular function
neuron projection morphogenesis Orthology biological process
axon development Orthology biological process
regulation of molecular function Orthology biological process
RNA binding Orthology molecular function
organelle organization Orthology biological process
macromolecular complex Orthology cellular component
cytoskeletal part Orthology cellular component
cell junction Orthology cellular component
adherens junction Orthology cellular component
neuron projection development Orthology biological process
cell development Orthology biological process
neurogenesis Orthology biological process
central nervous system development Orthology biological process
organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
synapse Orthology cellular component
mRNA catabolic process Orthology biological process
cytoplasmic vesicle Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
innate immune response Orthology biological process
macromolecular complex binding Orthology molecular function
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
microtubule-based process Orthology biological process
enzyme binding Orthology molecular function
molecular function regulator Orthology molecular function
cell projection part Orthology cellular component
microtubule-based movement Orthology biological process
intracellular transport Orthology biological process
animal organ development Orthology biological process
brain development Orthology biological process
cellular response to stress Orthology biological process
negative regulation of apoptotic process Orthology biological process
axonogenesis Orthology biological process
nervous system process Orthology biological process
generation of neurons Orthology biological process
positive regulation of cell proliferation Orthology biological process
chemical synaptic transmission Orthology biological process
plasma membrane region Orthology cellular component
intracellular part Orthology cellular component
neuron part Orthology cellular component
membrane part Orthology cellular component
lysosomal membrane Orthology cellular component

GO (Orthology)

103 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
double-stranded RNA binding Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
structural constituent of eye lens Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
peroxisome Hs cellular component
cytosol Hs cellular component
polysome Hs cellular component
cytoskeleton Hs cellular component
intermediate filament Hs cellular component
plasma membrane Hs cellular component
cell-cell junction Hs cellular component
fascia adherens Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cytoskeleton organization Hs biological process
regulation of heart contraction Hs biological process
protein C-terminus binding Hs molecular function
cytoskeletal protein binding Hs molecular function
positive regulation of gene expression Hs biological process
negative regulation of neuron projection development Hs biological process
astrocyte development Hs biological process
intercalated disc Hs cellular component
membrane Hs cellular component
viral process Hs biological process
cytokine-mediated signaling pathway Hs biological process
protein domain specific binding Hs molecular function
Z disc Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
cell leading edge Hs cellular component
neuromuscular junction Hs cellular component
sarcolemma Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
neuron projection Hs cellular component
contractile fiber Hs cellular component
regulation of mRNA stability Hs biological process
type III intermediate filament Hs cellular component
intermediate filament organization Hs biological process
intermediate filament cytoskeleton Hs cellular component
phagocytic vesicle Hs cellular component
positive regulation of translation Hs biological process
SMAD protein signal transduction Hs biological process
extracellular exosome Hs cellular component
cellular response to interferon-gamma Hs biological process
scaffold protein binding Hs molecular function
cardiac myofibril Hs cellular component
keratin filament binding Hs molecular function
MAPK cascade Hs biological process
microtubule cytoskeleton organization Hs biological process
Ras guanyl-nucleotide exchange factor activity Hs molecular function
integrin binding Hs molecular function
extracellular space Hs cellular component
intracellular Hs cellular component
nucleoplasm Hs cellular component
lysosome Hs cellular component
neurofilament Hs cellular component
multicellular organism development Hs biological process
nervous system development Hs biological process
microtubule binding Hs molecular function
anterograde axonal transport Hs biological process
retrograde axonal transport Hs biological process
response to wounding Hs biological process
response to toxic substance Hs biological process
response to organic substance Hs biological process
axonal transport of mitochondrion Hs biological process
kinase binding Hs molecular function
spinal cord development Hs biological process
cerebral cortex development Hs biological process
cell differentiation Hs biological process
extracellular matrix organization Hs biological process
axon Hs cellular component
growth cone Hs cellular component
protein binding, bridging Hs molecular function
neuron projection regeneration Hs biological process
nuclear membrane Hs cellular component
TSC1-TSC2 complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
locomotion Hs biological process
myelin sheath Hs cellular component
phospholipase binding Hs molecular function
response to peptide hormone Hs biological process
negative regulation of neuron apoptotic process Hs biological process
cell body Hs cellular component
intermediate filament cytoskeleton organization Hs biological process
protein heterodimerization activity Hs molecular function
neuron projection morphogenesis Hs biological process
positive regulation of axonogenesis Hs biological process
neuromuscular process controlling balance Hs biological process
protein polymerization Hs biological process
neurofilament cytoskeleton organization Hs biological process
positive regulation of glial cell proliferation Hs biological process
long-term synaptic potentiation Hs biological process
axon development Hs biological process
regulation of molecular function Hs biological process
glial cell projection Hs cellular component
neurofibrillary tangle Hs cellular component
astrocyte projection Hs cellular component
astrocyte end-foot Hs cellular component
cytoplasmic side of lysosomal membrane Hs cellular component
axon cytoplasm Hs cellular component

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
double-stranded RNA binding Hs molecular function 338 3.17e-111
structural molecule activity Hs molecular function 338 3.17e-111
structural constituent of cytoskeleton Hs molecular function 338 3.17e-111
structural constituent of eye lens Hs molecular function 338 3.17e-111
protein binding Hs molecular function 338 3.17e-111
nucleus Hs cellular component 303 6.64e-98
cytoplasm Hs cellular component 338 3.17e-111
peroxisome Hs cellular component 338 3.17e-111
cytosol Hs cellular component 338 3.17e-111
polysome Hs cellular component 338 3.17e-111
cytoskeleton Hs cellular component 338 3.17e-111
intermediate filament Hs cellular component 338 3.17e-111
plasma membrane Hs cellular component 338 3.17e-111
cell-cell junction Hs cellular component 303 6.64e-98
fascia adherens Hs cellular component 303 6.64e-98
focal adhesion Hs cellular component 338 3.17e-111
protein C-terminus binding Hs molecular function 338 3.17e-111
cytoskeletal protein binding Hs molecular function 303 6.64e-98
intercalated disc Hs cellular component 303 6.64e-98
membrane Hs cellular component 303 6.64e-98
protein domain specific binding Hs molecular function 338 3.17e-111
Z disc Hs cellular component 303 6.64e-98
intracellular ribonucleoprotein complex Hs cellular component 338 3.17e-111
cell leading edge Hs cellular component 338 3.17e-111
neuromuscular junction Hs cellular component 303 6.64e-98
sarcolemma Hs cellular component 303 6.64e-98
identical protein binding Hs molecular function 338 3.17e-111
cell projection Hs cellular component 338 3.17e-111
neuron projection Hs cellular component 338 3.17e-111
contractile fiber Hs cellular component 303 6.64e-98
type III intermediate filament Hs cellular component 299 3.64e-96
intermediate filament cytoskeleton Hs cellular component 303 6.64e-98
phagocytic vesicle Hs cellular component 338 3.17e-111
extracellular exosome Hs cellular component 338 3.17e-111
scaffold protein binding Hs molecular function 338 3.17e-111
cardiac myofibril Hs cellular component 303 6.64e-98
keratin filament binding Hs molecular function 338 3.17e-111

GO (InterProScan)

2 results

GO Term Analysis Type e-value
structural molecule activity SMART molecular function 2.5E-130
intermediate filament SMART cellular component 2.5E-130

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