Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Reg_chr_condens	Pfam	Regulator of chromosome condensation, RCC1
Reg_chr_condens	ProSiteProfiles	Regulator of chromosome condensation, RCC1
Reg_chr_condens	PRINTS	Regulator of chromosome condensation, RCC1
BTB/POZ_dom	Pfam	BTB/POZ domain
BTB/POZ_dom	ProSiteProfiles	BTB/POZ domain
RCC1/BLIP-II	Gene3D	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
RCC1/BLIP-II	SUPERFAMILY	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
SKP1/BTB/POZ_sf	SUPERFAMILY	SKP1/BTB/POZ domain superfamily
Reg_chr_condens	ProSitePatterns	Regulator of chromosome condensation, RCC1
BTB/POZ_dom	SMART	BTB/POZ domain

GOSlim

23 results

GO Term	Annotation Origin	Type
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrial inner membrane	Blast	cellular component
cytoskeleton	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
cell cycle	Orthology	biological process
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
transferase activity	Blast	molecular function
cytoplasmic vesicle	Orthology	cellular component
ubiquitin protein ligase binding	Blast	molecular function
metal ion binding	Blast	molecular function
regulation of molecular function	Orthology	biological process
endomembrane system	Orthology	cellular component
enzyme binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
organelle organization	Orthology	biological process
cytoplasmic part	Blast	cellular component
microtubule organizing center	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
acrosomal vesicle	Hs	cellular component
Ran guanyl-nucleotide exchange factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cell cycle	Hs	biological process
cytoplasmic vesicle	Hs	cellular component
regulation of molecular function	Hs	biological process

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
acrosomal vesicle	Hs	cellular component	580	0.0
ubiquitin-protein transferase activity	Hs	molecular function	155	2.08e-39
guanyl-nucleotide exchange factor activity	Hs	molecular function	155	2.08e-39
Ran guanyl-nucleotide exchange factor activity	Hs	molecular function	580	0.0
protein binding	Hs	molecular function	617	0.0
nucleus	Hs	cellular component	617	0.0
nucleoplasm	Hs	cellular component	155	2.08e-39
cytoplasm	Hs	cellular component	617	0.0
mitochondrial inner membrane	Hs	cellular component	155	2.08e-39
centriole	Hs	cellular component	155	2.08e-39
cytoskeleton	Hs	cellular component	155	2.08e-39
zinc ion binding	Hs	molecular function	155	2.08e-39
membrane	Hs	cellular component	155	2.08e-39
transferase activity	Hs	molecular function	155	2.08e-39
cytoplasmic vesicle	Hs	cellular component	580	0.0
ubiquitin protein ligase binding	Hs	molecular function	155	2.08e-39
SUMO binding	Hs	molecular function	155	2.08e-39
metal ion binding	Hs	molecular function	155	2.08e-39
ubiquitin protein ligase activity	Hs	molecular function	155	2.08e-39

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	2.8E-20

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location