Gene Card
Best human hits
SMNDC1; TDRD3; ZGPAT
Species
Unique Gene ID
Harore.g00001336
Gene Model ID
Harore.CG.MTP2014.S647.g01336
Location
S647:31060..33166
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Survival_motor_neuron | Pfam | Survival motor neuron |
| Tudor | ProSiteProfiles | Tudor domain |
| Tudor | SMART | Tudor domain |
GOSlim
25 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA splicing, via transesterification reactions | Orthology | biological process |
| mRNA splicing, via spliceosome | Orthology | biological process |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| chromatin binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| transcription coactivator activity | Blast | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytosol | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| mRNA processing | Orthology | biological process |
| apoptotic process | Orthology | biological process |
| RNA splicing | Orthology | biological process |
| nuclear speck | Orthology | cellular component |
| sequence-specific DNA binding | Blast | molecular function |
| metal ion binding | Blast | molecular function |
| nuclear part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| nuclear body | Orthology | cellular component |
GO (Orthology)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA splicing, via transesterification reactions | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| mRNA processing | Hs | biological process |
| apoptotic process | Hs | biological process |
| RNA splicing | Hs | biological process |
| Cajal body | Hs | cellular component |
| nuclear speck | Hs | cellular component |
GO (Blast)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 41.6 | 3.13e-04 |
| transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 41.6 | 3.13e-04 |
| nucleic acid binding | Hs | molecular function | 41.6 | 3.13e-04 |
| DNA binding | Hs | molecular function | 41.6 | 3.13e-04 |
| chromatin binding | Hs | molecular function | 43.5 | 7.95e-05 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 41.6 | 3.13e-04 |
| transcription coactivator activity | Hs | molecular function | 43.5 | 7.95e-05 |
| RNA binding | Hs | molecular function | 205 | 2.62e-66 |
| protein binding | Hs | molecular function | 205 | 2.62e-66 |
| nucleus | Hs | cellular component | 205 | 2.62e-66 |
| nucleoplasm | Hs | cellular component | 205 | 2.62e-66 |
| spliceosomal complex | Hs | cellular component | 205 | 2.62e-66 |
| cytoplasm | Hs | cellular component | 205 | 2.62e-66 |
| Golgi apparatus | Hs | cellular component | 43.5 | 7.95e-05 |
| cytosol | Hs | cellular component | 43.5 | 7.95e-05 |
| plasma membrane | Hs | cellular component | 41.6 | 3.13e-04 |
| Cajal body | Hs | cellular component | 205 | 2.62e-66 |
| nuclear speck | Hs | cellular component | 205 | 2.62e-66 |
| methylated histone binding | Hs | molecular function | 43.5 | 7.95e-05 |
| exon-exon junction complex | Hs | cellular component | 43.5 | 7.95e-05 |
| sequence-specific DNA binding | Hs | molecular function | 41.6 | 3.13e-04 |
| metal ion binding | Hs | molecular function | 41.6 | 3.13e-04 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| RNA binding | Pfam | molecular function | 1.0E-8 |
| nucleus | Pfam | cellular component | 1.0E-8 |
| cytoplasm | Pfam | cellular component | 1.0E-8 |
| mRNA processing | Pfam | biological process | 1.0E-8 |
