Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

LRFN1; NYX; PXDN

Species

H.roretzi

Unique Gene ID

Harore.g00007538

Gene Model ID

Harore.CG.MTP2014.S66.g07538

Location

S66:126762..130431

Transcript Models and Sequences

  Harore.CG.MTP2014.S66.g07538.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
Leu-rich_rpt Pfam Leucine-rich repeat
Cys-rich_flank_reg_C SMART Cysteine-rich flanking region, C-terminal
Ig_sub SMART Immunoglobulin subtype
Ig-like_fold Gene3D Immunoglobulin-like fold
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain

GOSlim

31 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
intracellular Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytokine-mediated signaling pathway Blast biological process
heme binding Blast molecular function
cell junction Blast cellular component
synapse Blast cellular component
postsynaptic membrane Blast cellular component
metal ion binding Blast molecular function
oxidation-reduction process Blast biological process
extracellular exosome Blast cellular component
catalytic activity Blast molecular function
enzyme regulator activity Blast molecular function
protein kinase binding Blast molecular function
protein kinase activity Blast molecular function
receptor binding Blast molecular function
molecular function regulator Blast molecular function
signaling receptor activity Blast molecular function
negative regulation of signal transduction Blast biological process
extracellular region part Blast cellular component
structural molecule activity Blast molecular function
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
peroxidase activity Hs molecular function 93.2 1.27e-19
protein kinase inhibitor activity Hs molecular function 95.1 8.82e-21
interleukin-1 receptor antagonist activity Hs molecular function 93.2 1.27e-19
extracellular matrix structural constituent Hs molecular function 93.2 1.27e-19
protein binding Hs molecular function 95.1 8.82e-21
extracellular region Hs cellular component 95.1 8.82e-21
proteinaceous extracellular matrix Hs cellular component 95.1 8.82e-21
extracellular space Hs cellular component 93.2 1.27e-19
intracellular Hs cellular component 95.1 8.82e-21
cytoplasm Hs cellular component 95.1 8.82e-21
endoplasmic reticulum Hs cellular component 93.2 1.27e-19
plasma membrane Hs cellular component 90.1 7.76e-19
cell surface Hs cellular component 90.1 7.76e-19
postsynaptic density Hs cellular component 90.1 7.76e-19
membrane Hs cellular component 90.1 7.76e-19
integral component of membrane Hs cellular component 90.1 7.76e-19
oxidoreductase activity Hs molecular function 93.2 1.27e-19
heme binding Hs molecular function 93.2 1.27e-19
cell junction Hs cellular component 90.1 7.76e-19
extracellular matrix Hs cellular component 93.2 1.27e-19
synapse Hs cellular component 90.1 7.76e-19
postsynaptic membrane Hs cellular component 90.1 7.76e-19
metal ion binding Hs molecular function 93.2 1.27e-19
extracellular exosome Hs cellular component 93.2 1.27e-19

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 3.9E-12