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GENE CARD

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Gene Card

Best human hits

LRFN1; LRFN5; LRRC24

Species

H.roretzi

Unique Gene ID

Harore.g00002244

Gene Model ID

Harore.CG.MTP2014.S790.g02244

Location

S790:3808..7460

Transcript Models and Sequences

  Harore.CG.MTP2014.S790.g02244.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt Pfam Leucine-rich repeat
Ig-like_fold Gene3D Immunoglobulin-like fold
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain

GOSlim

12 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular space Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
synapse Blast cellular component
postsynaptic membrane Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 80.5 2.10e-15
proteinaceous extracellular matrix Hs cellular component 80.5 2.10e-15
extracellular space Hs cellular component 80.5 2.10e-15
plasma membrane Hs cellular component 71.6 1.19e-12
cell surface Hs cellular component 80.5 2.10e-15
postsynaptic density Hs cellular component 71.6 1.19e-12
membrane Hs cellular component 80.5 2.10e-15
integral component of membrane Hs cellular component 80.5 2.10e-15
cell junction Hs cellular component 71.6 1.19e-12
synapse Hs cellular component 71.6 1.19e-12
postsynaptic membrane Hs cellular component 71.6 1.19e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.6E-8