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GENE CARD

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Gene Card

Best human hits

COPA; COPB2; WDR5

Species

H.roretzi

Unique Gene ID

Harore.g00001333

Gene Model ID

Harore.CG.MTP2014.S80.g01333

Location

S80:265142..274396

Transcript Models and Sequences

  Harore.CG.MTP2014.S80.g01333.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat SMART WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
Coatomer_asu PIRSF Coatomer alpha subunit
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
Coatomer_WD-assoc_reg Pfam Coatomer, WD associated region
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
Coatomer_asu_C Pfam Coatomer, alpha subunit, C-terminal
WD40_repeat Pfam WD40 repeat
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat

GOSlim

38 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
structural molecule activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
intracellular Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
intracellular protein transport Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
extracellular exosome Orthology cellular component
receptor binding Orthology molecular function
molecular function regulator Orthology molecular function
regulation of signal transduction Orthology biological process
signaling receptor activity Orthology molecular function
intracellular transport Orthology biological process
regulation of molecular function Orthology biological process
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
Golgi apparatus part Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle part Orthology cellular component
nucleoplasm part Blast cellular component
organelle organization Blast biological process
transferase activity Blast molecular function
cellular protein modification process Blast biological process
cell projection part Blast cellular component
plasma membrane region Blast cellular component
microtubule organizing center Blast cellular component

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
hormone activity Hs molecular function
structural molecule activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
retrograde vesicle-mediated transport, Golgi to ER Hs biological process
intra-Golgi vesicle-mediated transport Hs biological process
regulation of receptor activity Hs biological process
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
membrane coat Hs cellular component
COPI vesicle coat Hs cellular component
transport vesicle Hs cellular component
COPI-coated vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone acetyltransferase complex Hs cellular component 115 9.85e-28
Golgi membrane Hs cellular component 1937 0.0
hormone activity Hs molecular function 1937 0.0
structural molecule activity Hs molecular function 1937 0.0
protein binding Hs molecular function 1937 0.0
extracellular region Hs cellular component 1937 0.0
extracellular space Hs cellular component 1937 0.0
intracellular Hs cellular component 115 9.85e-28
nucleus Hs cellular component 115 9.85e-28
nucleoplasm Hs cellular component 115 9.85e-28
Ada2/Gcn5/Ada3 transcription activator complex Hs cellular component 115 9.85e-28
cytoplasm Hs cellular component 1937 0.0
endoplasmic reticulum membrane Hs cellular component 1937 0.0
Golgi apparatus Hs cellular component 1937 0.0
cytosol Hs cellular component 1937 0.0
membrane Hs cellular component 1937 0.0
histone-lysine N-methyltransferase activity Hs molecular function 115 9.85e-28
membrane coat Hs cellular component 1937 0.0
COPI vesicle coat Hs cellular component 1937 0.0
transport vesicle Hs cellular component 1937 0.0
COPI-coated vesicle membrane Hs cellular component 1937 0.0
cytoplasmic vesicle Hs cellular component 1937 0.0
methylated histone binding Hs molecular function 115 9.85e-28
histone methyltransferase complex Hs cellular component 115 9.85e-28
ciliary basal body Hs cellular component 115 9.85e-28
histone methyltransferase activity (H3-K4 specific) Hs molecular function 115 9.85e-28
histone acetyltransferase activity (H4-K5 specific) Hs molecular function 115 9.85e-28
histone acetyltransferase activity (H4-K8 specific) Hs molecular function 115 9.85e-28
MLL3/4 complex Hs cellular component 115 9.85e-28
histone acetyltransferase activity (H4-K16 specific) Hs molecular function 115 9.85e-28
Set1C/COMPASS complex Hs cellular component 115 9.85e-28
extracellular exosome Hs cellular component 1937 0.0
MLL1 complex Hs cellular component 115 9.85e-28

GO (InterProScan)

6 results

GO Term Analysis Type e-value
structural molecule activity Pfam molecular function 5.2E-165
protein binding Pfam molecular function 5.2E-165
intracellular protein transport Pfam biological process 5.2E-165
vesicle-mediated transport Pfam biological process 5.2E-165
membrane coat Pfam cellular component 2.5E-139
COPI vesicle coat Pfam cellular component 5.2E-165