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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S8...'

Gene Card

Best human hits

IRF1; IRF2; IRF7

Species

H.roretzi

Unique Gene ID

Harore.g00008367

Gene Model ID

Harore.CG.MTP2014.S884.g08367

Location

S884:7270..9304

Transcript Models and Sequences

  Harore.CG.MTP2014.S884.g08367.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Interferon_reg_fact_DNA-bd_dom Pfam Interferon regulatory factor DNA-binding domain
SMAD-like_dom_sf Gene3D SMAD-like domain superfamily
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
Interferon_reg_fact_DNA-bd_dom ProSiteProfiles Interferon regulatory factor DNA-binding domain
Interferon_reg_fact_DNA-bd_dom SMART Interferon regulatory factor DNA-binding domain
Interferon_reg_fact_DNA-bd_dom PANTHER Interferon regulatory factor DNA-binding domain
Interferon_reg_factor-3 Pfam Interferon regulatory factor-3

GOSlim

21 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
focal adhesion Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
endosome Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 42.4 3.44e-04
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 45.4 3.34e-05
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 42.4 3.44e-04
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 41.2 0.001
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 45.4 3.34e-05
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 41.2 0.001
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 42.4 3.44e-04
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 45.4 3.34e-05
DNA binding Hs molecular function 45.4 3.34e-05
transcription factor activity, sequence-specific DNA binding Hs molecular function 45.4 3.34e-05
protein binding Hs molecular function 45.4 3.34e-05
nucleus Hs cellular component 45.4 3.34e-05
nucleoplasm Hs cellular component 45.4 3.34e-05
cytoplasm Hs cellular component 42.4 3.44e-04
cytosol Hs cellular component 45.4 3.34e-05
focal adhesion Hs cellular component 45.4 3.34e-05
endosome membrane Hs cellular component 41.2 0.001
sequence-specific DNA binding Hs molecular function 42.4 3.44e-04
transcription regulatory region DNA binding Hs molecular function 45.4 3.34e-05

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding Pfam molecular function 2.7E-7
regulation of transcription, DNA-templated Pfam biological process 2.7E-7
transcription regulatory region DNA binding PANTHER molecular function 3.5E-25

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