Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
RhoGAP_dom	ProSiteProfiles	Rho GTPase-activating protein domain
RhoGAP_dom	Pfam	Rho GTPase-activating protein domain
SH3_domain	PRINTS	SH3 domain
SH3_domain	SMART	SH3 domain
Rho_GTPase_activation_prot	Gene3D	Rho GTPase activation protein
SH3_domain	ProSiteProfiles	SH3 domain
RhoGAP_dom	SMART	Rho GTPase-activating protein domain
SH3-like_dom_sf	SUPERFAMILY	SH3-like domain superfamily
SH3_domain	Pfam	SH3 domain
Rho_GTPase_activation_prot	SUPERFAMILY	Rho GTPase activation protein

GOSlim

42 results

GO Term	Annotation Origin	Type
GTPase activator activity	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
microtubule	Orthology	cellular component
signal transduction	Orthology	biological process
nervous system development	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
positive regulation of GTPase activity	Orthology	biological process
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
lamellipodium	Orthology	cellular component
cell junction	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
identical protein binding	Orthology	molecular function
protein homodimerization activity	Orthology	molecular function
cell projection	Orthology	cellular component
synapse	Orthology	cellular component
postsynaptic membrane	Orthology	cellular component
protein heterodimerization activity	Orthology	molecular function
neuron projection morphogenesis	Orthology	biological process
organelle organization	Orthology	biological process
small GTPase mediated signal transduction	Orthology	biological process
cell migration	Orthology	biological process
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
axonogenesis	Orthology	biological process
enzyme binding	Orthology	molecular function
regulation of signal transduction	Orthology	biological process
organelle	Orthology	cellular component
postsynapse	Orthology	cellular component
neuron part	Orthology	cellular component
cell adhesion	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cell projection assembly	Orthology	biological process
cellular process	Orthology	biological process
neuron projection development	Orthology	biological process
cell development	Orthology	biological process
generation of neurons	Orthology	biological process

GO (Orthology)

43 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
SH3/SH2 adaptor activity	Hs	molecular function
GTPase activator activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
microtubule	Hs	cellular component
cytoskeleton organization	Hs	biological process
signal transduction	Hs	biological process
Rho protein signal transduction	Hs	biological process
nervous system development	Hs	biological process
positive regulation of signal transduction	Hs	biological process
negative regulation of cell migration	Hs	biological process
growth cone	Hs	cellular component
negative regulation of axon extension	Hs	biological process
positive regulation of GTPase activity	Hs	biological process
Rac GTPase binding	Hs	molecular function
regulation of small GTPase mediated signal transduction	Hs	biological process
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
plasma membrane	Hs	cellular component
postsynaptic density	Hs	cellular component
membrane	Hs	cellular component
lamellipodium	Hs	cellular component
cell junction	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
substrate adhesion-dependent cell spreading	Hs	biological process
identical protein binding	Hs	molecular function
protein homodimerization activity	Hs	molecular function
cell projection	Hs	cellular component
dendritic spine	Hs	cellular component
dendritic spine head	Hs	cellular component
synapse	Hs	cellular component
postsynaptic membrane	Hs	cellular component
phagocytic vesicle	Hs	cellular component
filopodium assembly	Hs	biological process
protein heterodimerization activity	Hs	molecular function
neuron projection morphogenesis	Hs	biological process
actin filament severing	Hs	biological process
negative regulation of filopodium assembly	Hs	biological process
dendritic spine development	Hs	biological process
negative regulation of neuron migration	Hs	biological process
positive regulation of neuron migration	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
SH3/SH2 adaptor activity	Hs	molecular function	342	4.16e-103
GTPase activator activity	Hs	molecular function	426	2.62e-133
protein binding	Hs	molecular function	426	2.62e-133
cytoplasm	Hs	cellular component	426	2.62e-133
Golgi apparatus	Hs	cellular component	342	4.16e-103
cytosol	Hs	cellular component	426	2.62e-133
microtubule	Hs	cellular component	342	4.16e-103
growth cone	Hs	cellular component	342	4.16e-103
Rac GTPase binding	Hs	molecular function	426	2.62e-133

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	2.63E-17
signal transduction	SMART	biological process	4.6E-54

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location