Aniseed - Gene card

Gene 'KH2012:KH.C1.1118'

Gene Card

Best human hits

AIF1L; EFHD1; EFHD2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000134

Gene Model ID

KH2012:KH.C1.1118

Location

KhC1:3626099..3630130

Transcript Models and Sequences

KH2012:KH.C1.1118.v1.A.SL1-1
KH2012:KH.C1.1118.v2.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001879
NCBI Reference Sequence	XM_002128267.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb039g14

Plate: R1CiGC32n23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
EF_hand_dom	Pfam	EF-hand domain
EF_hand_dom	CDD	EF-hand domain
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF_hand_dom	SMART	EF-hand domain
EF_Hand_1_Ca_BS	ProSitePatterns	EF-Hand 1, calcium-binding site

GOSlim

19 results

GO Term	Annotation Origin	Type
actin binding	Blast	molecular function
calcium ion binding	Orthology	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Blast	cellular component
focal adhesion	Blast	cellular component
membrane	Orthology	cellular component
neuron projection development	Orthology	biological process
cell projection	Blast	cellular component
membrane raft	Orthology	cellular component
metal ion binding	Orthology	molecular function
actin filament binding	Blast	molecular function
extracellular exosome	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
cytoskeletal part	Blast	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
calcium ion binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
membrane	Hs	cellular component
neuron projection development	Hs	biological process
membrane raft	Hs	cellular component
cadherin binding	Hs	molecular function
metal ion binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	57.4	2.67e-10
calcium ion binding	Hs	molecular function	211	5.23e-69
cytoplasm	Hs	cellular component	57.4	2.67e-10
mitochondrion	Hs	cellular component	194	3.56e-62
mitochondrial inner membrane	Hs	cellular component	194	3.56e-62
cytoskeleton	Hs	cellular component	57.4	2.67e-10
actin filament	Hs	cellular component	57.4	2.67e-10
plasma membrane	Hs	cellular component	57.4	2.67e-10
focal adhesion	Hs	cellular component	57.4	2.67e-10
actin cytoskeleton	Hs	cellular component	57.4	2.67e-10
membrane	Hs	cellular component	211	5.23e-69
ruffle membrane	Hs	cellular component	57.4	2.67e-10
cell projection	Hs	cellular component	57.4	2.67e-10
membrane raft	Hs	cellular component	211	5.23e-69
cadherin binding	Hs	molecular function	211	5.23e-69
metal ion binding	Hs	molecular function	211	5.23e-69
actin filament binding	Hs	molecular function	57.4	2.67e-10
extracellular exosome	Hs	cellular component	194	3.56e-62

GO (InterProScan)