Gene Card
Best human hits
DDX58; DHX58; IFIH1
Unique Gene ID
Cirobu.g00000564
Gene Model ID
KH2012:KH.C1.334
Location
KhC1:4895014..4907294
Transcript Models and Sequences
KH2012:KH.C1.334.v1.A.SL2-1
KH2012:KH.C1.334.v1.A.SL3-1
KH2012:KH.C1.334.v1.R.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000012878 |
| ENSEMBL | ENSCING00000012881 |
Gateway full ORF
3 results
Gene collection 1 (N. Satoh)
2 results
cibd004p22
Plate: R1CiGC37m24
cicl085d24
Plate: R1CiGC39b05
n/a
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Click here to see the tree inference method
InterPro
12 results
| IPR Term | Analysis | Definition |
|---|---|---|
| AAA+_ATPase | SMART | AAA+ ATPase domain |
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| Helicase/UvrB_N | Pfam | Helicase/UvrB, N-terminal |
| Helicase_C | Pfam | Helicase, C-terminal |
| Helicase_C | ProSiteProfiles | Helicase, C-terminal |
| RLR_C_sf | Gene3D | RIG-I-like receptor, C-terminal domain superfamily |
| RLR_CTR | ProSiteProfiles | RIG-I-like receptor, C-terminal regulatory domain |
| RLR_CTR | Pfam | RIG-I-like receptor, C-terminal regulatory domain |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Helicase_C | CDD | Helicase, C-terminal |
| Helicase_C | SMART | Helicase, C-terminal |
GOSlim
24 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| double-stranded DNA binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| cell junction | Blast | cellular component |
| ubiquitin protein ligase binding | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| cell projection | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| nucleoside-triphosphatase activity | Blast | molecular function |
| cell projection membrane | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| macromolecular complex binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
27 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 309 | 2.16e-90 |
| nucleic acid binding | Hs | molecular function | 309 | 2.16e-90 |
| DNA binding | Hs | molecular function | 303 | 1.79e-87 |
| double-stranded DNA binding | Hs | molecular function | 309 | 2.16e-90 |
| RNA binding | Hs | molecular function | 309 | 2.16e-90 |
| double-stranded RNA binding | Hs | molecular function | 309 | 2.16e-90 |
| single-stranded RNA binding | Hs | molecular function | 309 | 2.16e-90 |
| helicase activity | Hs | molecular function | 309 | 2.16e-90 |
| protein binding | Hs | molecular function | 309 | 2.16e-90 |
| ATP binding | Hs | molecular function | 309 | 2.16e-90 |
| nucleus | Hs | cellular component | 303 | 1.79e-87 |
| cytoplasm | Hs | cellular component | 309 | 2.16e-90 |
| cytosol | Hs | cellular component | 309 | 2.16e-90 |
| cytoskeleton | Hs | cellular component | 309 | 2.16e-90 |
| plasma membrane | Hs | cellular component | 309 | 2.16e-90 |
| bicellular tight junction | Hs | cellular component | 309 | 2.16e-90 |
| zinc ion binding | Hs | molecular function | 309 | 2.16e-90 |
| actin cytoskeleton | Hs | cellular component | 309 | 2.16e-90 |
| membrane | Hs | cellular component | 309 | 2.16e-90 |
| hydrolase activity | Hs | molecular function | 309 | 2.16e-90 |
| cell junction | Hs | cellular component | 309 | 2.16e-90 |
| ubiquitin protein ligase binding | Hs | molecular function | 309 | 2.16e-90 |
| ruffle membrane | Hs | cellular component | 309 | 2.16e-90 |
| identical protein binding | Hs | molecular function | 309 | 2.16e-90 |
| cell projection | Hs | cellular component | 309 | 2.16e-90 |
| ribonucleoprotein complex binding | Hs | molecular function | 303 | 1.79e-87 |
| metal ion binding | Hs | molecular function | 309 | 2.16e-90 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | Pfam | molecular function | 2.3E-19 |
| ATP binding | Pfam | molecular function | 2.3E-19 |
| hydrolase activity | Pfam | molecular function | 2.3E-19 |
