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Gene Card

Best human hits

DDT; MIF

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001445

Gene Model ID

KH2012:KH.C10.24

Location

KhC10:3176164..3177123

Transcript Models and Sequences

  KH2012:KH.C10.24.v1.A.nonSL2-1
KH2012:KH.C10.24.v1.A.nonSL3-1
KH2012:KH.C10.24.v1.A.nonSL4-1
KH2012:KH.C10.24.v1.A.nonSL5-1
KH2012:KH.C10.24.v1.A.nonSL6-1
KH2012:KH.C10.24.v1.A.nonSL7-1
KH2012:KH.C10.24.v1.A.nonSL8-1
KH2012:KH.C10.24.v1.A.nonSL9-1
KH2012:KH.C10.24.v1.A.SL10-1
KH2012:KH.C10.24.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000021369
NCBI Reference Sequence XM_002120850.3
Collections

Gateway full ORF

1 result

cima885003

Plate: VES69_D16

Gene collection 1 (N. Satoh)

1 result

cicl043p01

Plate: R1CiGC12l20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Macrophage_inhib_fac ProDom Macrophage migration inhibitory factor
Macrophage_inhib_fac Pfam Macrophage migration inhibitory factor
Tautomerase/MIF_sf SUPERFAMILY Tautomerase/MIF superfamily
Macrophage_inhib_fac PANTHER Macrophage migration inhibitory factor
Tautomerase/MIF_sf Gene3D Tautomerase/MIF superfamily

GOSlim

45 results

GO Term Annotation Origin Type
immune system process Orthology biological process
receptor binding Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cell proliferation Orthology biological process
cell surface Orthology cellular component
negative regulation of gene expression Orthology biological process
vesicle Orthology cellular component
regulation of cell proliferation Orthology biological process
identical protein binding Orthology molecular function
negative regulation of apoptotic process Orthology biological process
myelin sheath Orthology cellular component
innate immune response Orthology biological process
extracellular exosome Orthology cellular component
cellular biosynthetic process Orthology biological process
protein phosphorylation Orthology biological process
enzyme binding Orthology molecular function
catalytic activity Orthology molecular function
molecular function regulator Orthology molecular function
regulation of signal transduction Orthology biological process
signaling receptor activity Orthology molecular function
defense response Orthology biological process
regulation of molecular function Orthology biological process
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
cellular metabolic process Orthology biological process
organic substance metabolic process Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
chemotaxis Orthology biological process
phosphorylation Orthology biological process
positive regulation of catalytic activity Orthology biological process
protein serine/threonine kinase activity Orthology molecular function
negative regulation of signal transduction Orthology biological process
protein transport Orthology biological process
cell migration Orthology biological process
protein homooligomerization Orthology biological process

GO (Orthology)

49 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
prostaglandin biosynthetic process Hs biological process
positive regulation of protein phosphorylation Hs biological process
protease binding Hs molecular function
immune system process Hs biological process
dopachrome isomerase activity Hs molecular function
receptor binding Hs molecular function
cytokine activity Hs molecular function
cytokine receptor binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
inflammatory response Hs biological process
cell surface receptor signaling pathway Hs biological process
cell aging Hs biological process
cell proliferation Hs biological process
cell surface Hs cellular component
regulation of receptor activity Hs biological process
negative regulation of gene expression Hs biological process
positive regulation of protein kinase A signaling Hs biological process
isomerase activity Hs molecular function
carboxylic acid metabolic process Hs biological process
DNA damage response, signal transduction by p53 class mediator Hs biological process
vesicle Hs cellular component
positive regulation of peptidyl-serine phosphorylation Hs biological process
secretory granule lumen Hs cellular component
chemoattractant activity Hs molecular function
regulation of cell proliferation Hs biological process
positive regulation of phosphorylation Hs biological process
identical protein binding Hs molecular function
negative regulation of apoptotic process Hs biological process
myelin sheath Hs cellular component
positive regulation of MAP kinase activity Hs biological process
negative regulation of DNA damage response, signal transduction by p53 class mediator Hs biological process
innate immune response Hs biological process
phenylpyruvate tautomerase activity Hs molecular function
positive regulation of cytokine secretion Hs biological process
positive regulation of peptidyl-tyrosine phosphorylation Hs biological process
leukocyte migration Hs biological process
positive chemotaxis Hs biological process
extracellular exosome Hs cellular component
protein homotrimerization Hs biological process
positive regulation of ERK1 and ERK2 cascade Hs biological process
negative regulation of cell cycle arrest Hs biological process
negative regulation of cell aging Hs biological process
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator Hs biological process
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protease binding Hs molecular function 62.0 1.32e-13
dopachrome isomerase activity Hs molecular function 62.0 1.32e-13
receptor binding Hs molecular function 62.0 1.32e-13
cytokine activity Hs molecular function 62.0 1.32e-13
cytokine receptor binding Hs molecular function 62.0 1.32e-13
protein binding Hs molecular function 62.0 1.32e-13
extracellular region Hs cellular component 62.0 1.32e-13
extracellular space Hs cellular component 62.0 1.32e-13
nucleoplasm Hs cellular component 62.0 1.32e-13
cytoplasm Hs cellular component 62.0 1.32e-13
cytosol Hs cellular component 62.0 1.32e-13
cell surface Hs cellular component 62.0 1.32e-13
lyase activity Hs molecular function 47.4 1.32e-07
isomerase activity Hs molecular function 62.0 1.32e-13
vesicle Hs cellular component 62.0 1.32e-13
D-dopachrome decarboxylase activity Hs molecular function 47.4 1.32e-07
secretory granule lumen Hs cellular component 62.0 1.32e-13
chemoattractant activity Hs molecular function 62.0 1.32e-13
identical protein binding Hs molecular function 62.0 1.32e-13
myelin sheath Hs cellular component 62.0 1.32e-13
phenylpyruvate tautomerase activity Hs molecular function 62.0 1.32e-13
extracellular exosome Hs cellular component 62.0 1.32e-13
ficolin-1-rich granule lumen Hs cellular component 62.0 1.32e-13

GO (InterProScan)

No result

GO Term Analysis Type e-value

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