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Gene Card

Best human hits

HEXA; HEXB

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001475

Gene Model ID

KH2012:KH.C10.267

Location

KhC10:4395356..4406237

Transcript Models and Sequences

  KH2012:KH.C10.267.v1.A.ND2-1
KH2012:KH.C10.267.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000013889
ENSEMBL ENSCING00000022492
NCBI Reference Sequence XM_009861706.2
Collections

Gateway full ORF

2 results

cien171867

Plate: VES96_L20

cien190784

Plate: VES99_D21

Gene collection 1 (N. Satoh)

1 result

citb016e09

Plate: R1CiGC30p02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
CHB_C_dom Pfam Chitobiase C-terminal domain
Hex-like_dom2 SUPERFAMILY Beta-hexosaminidase-like, domain 2
CBM2/CBM3_carb-bd_dom_sf SUPERFAMILY CBM2/CBM3, carbohydrate-binding domain superfamily
Hex-like_dom2 Gene3D Beta-hexosaminidase-like, domain 2
Ig_E-set SUPERFAMILY Immunoglobulin E-set
CHB/HEX_N_dom Pfam Chitobiase/beta-hexosaminidases, N-terminal domain
Ig-like_fold Gene3D Immunoglobulin-like fold
CHB/HEX_N_dom SMART Chitobiase/beta-hexosaminidases, N-terminal domain
HEX_bac_N Pfam Beta-hexosaminidase, bacterial type, N-terminal
Beta_hexosaminidase_sua/sub PRINTS Beta-hexosaminidase
CBM2_carb-bd_dom_sf Gene3D CBM2, carbohydrate-binding domain superfamily
Glycoside_hydrolase_SF SUPERFAMILY Glycoside hydrolase superfamily
Glyco_hydro_20_cat Pfam Glycoside hydrolase family 20, catalytic domain

GOSlim

16 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
lysosome Blast cellular component
membrane Blast cellular component
hydrolase activity Blast molecular function
protein homodimerization activity Blast molecular function
protein heterodimerization activity Blast molecular function
extracellular exosome Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
transferase activity Blast molecular function
vacuolar part Blast cellular component
intracellular organelle lumen Blast cellular component
organic substance metabolic process InterProScan biological process
binding InterProScan molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
acrosomal vesicle Hs cellular component 118 1.17e-27
hydrolase activity, hydrolyzing O-glycosyl compounds Hs molecular function 118 1.17e-27
beta-N-acetylhexosaminidase activity Hs molecular function 118 1.17e-27
protein binding Hs molecular function 118 1.17e-27
extracellular region Hs cellular component 118 1.17e-27
extracellular space Hs cellular component 118 1.17e-27
lysosome Hs cellular component 118 1.17e-27
acetylglucosaminyltransferase activity Hs molecular function 118 1.17e-27
membrane Hs cellular component 118 1.17e-27
hydrolase activity Hs molecular function 118 1.17e-27
hydrolase activity, acting on glycosyl bonds Hs molecular function 118 1.17e-27
azurophil granule lumen Hs cellular component 118 1.17e-27
azurophil granule Hs cellular component 118 1.17e-27
protein homodimerization activity Hs molecular function 118 1.17e-27
lysosomal lumen Hs cellular component 118 1.17e-27
protein heterodimerization activity Hs molecular function 118 1.17e-27
extracellular exosome Hs cellular component 118 1.17e-27
N-acetyl-beta-D-galactosaminidase activity Hs molecular function 118 1.17e-27

GO (InterProScan)

4 results

GO Term Analysis Type e-value
hydrolase activity, hydrolyzing O-glycosyl compounds Pfam molecular function 5.0E-97
beta-N-acetylhexosaminidase activity PRINTS molecular function 3.9E-43
carbohydrate metabolic process Pfam biological process 5.0E-97
carbohydrate binding SUPERFAMILY molecular function 2.72E-24

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