Aniseed - Gene card

Gene Card

Best human hits

TMED10; TMED4; TMED9

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001890

Gene Model ID

KH2012:KH.C10.87

Location

KhC10:1798758..1800340

Transcript Models and Sequences

KH2012:KH.C10.87.v1.A.nonSL2-1
KH2012:KH.C10.87.v1.A.SL1-1
KH2012:KH.C10.87.v1.A.SL3-1
KH2012:KH.C10.87.v1.A.SL4-1
KH2012:KH.C10.87.v1.A.SL5-1
KH2012:KH.C10.87.v2.B.nonSL2-1
KH2012:KH.C10.87.v2.B.SL1-1
KH2012:KH.C10.87.v2.B.SL3-1
KH2012:KH.C10.87.v2.B.SL4-1
KH2012:KH.C10.87.v2.B.SL5-1
KH2012:KH.C10.87.v3.A.nonSL2-1
KH2012:KH.C10.87.v3.A.SL1-1
KH2012:KH.C10.87.v3.A.SL3-1
KH2012:KH.C10.87.v3.A.SL4-1
KH2012:KH.C10.87.v3.A.SL5-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000008258
NCBI Reference Sequence	XM_009861647.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl004d24

Plate: R1CiGC08l19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
GOLD_dom	SMART	GOLD domain
GOLD_dom	ProSiteProfiles	GOLD domain
TMP21-related	PANTHER	TMP21-related
GOLD_dom	Pfam	GOLD domain

GOSlim

29 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
signal transducer activity	Orthology	molecular function
protein binding	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
plasma membrane	Blast	cellular component
signal transduction	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
cytoplasmic vesicle	Orthology	cellular component
melanosome	Blast	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular transport	Orthology	biological process
cytoplasm	Orthology	cellular component
organelle organization	Orthology	biological process
endomembrane system	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
Golgi apparatus part	Blast	cellular component
whole membrane	Blast	cellular component
intracellular organelle part	Blast	cellular component
plasma membrane part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
signal transducer activity	Hs	molecular function
protein binding	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
Golgi apparatus	Hs	cellular component
ER to Golgi vesicle-mediated transport	Hs	biological process
retrograde vesicle-mediated transport, Golgi to ER	Hs	biological process
Golgi organization	Hs	biological process
signal transduction	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
syntaxin binding	Hs	molecular function
transport vesicle	Hs	cellular component
trans-Golgi network transport vesicle	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment membrane	Hs	cellular component
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	333	6.27e-115
signal transducer activity	Hs	molecular function	333	4.85e-115
protein binding	Hs	molecular function	333	6.27e-115
endoplasmic reticulum	Hs	cellular component	333	4.85e-115
endoplasmic reticulum membrane	Hs	cellular component	333	4.85e-115
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	333	6.27e-115
Golgi apparatus	Hs	cellular component	333	6.27e-115
cis-Golgi network	Hs	cellular component	110	1.66e-28
plasma membrane	Hs	cellular component	110	1.66e-28
ER to Golgi transport vesicle membrane	Hs	cellular component	110	1.66e-28
membrane	Hs	cellular component	333	4.85e-115
integral component of membrane	Hs	cellular component	333	4.85e-115
syntaxin binding	Hs	molecular function	333	6.27e-115
transport vesicle	Hs	cellular component	333	6.27e-115
COPI-coated vesicle	Hs	cellular component	110	1.66e-28
trans-Golgi network transport vesicle	Hs	cellular component	333	6.27e-115
transport vesicle membrane	Hs	cellular component	110	1.66e-28
secretory granule membrane	Hs	cellular component	110	1.66e-28
cytoplasmic vesicle	Hs	cellular component	110	1.66e-28
endoplasmic reticulum-Golgi intermediate compartment membrane	Hs	cellular component	333	6.27e-115
melanosome	Hs	cellular component	110	1.66e-28
zymogen granule membrane	Hs	cellular component	110	1.66e-28
intracellular membrane-bounded organelle	Hs	cellular component	110	1.66e-28
extracellular exosome	Hs	cellular component	333	4.85e-115
gamma-secretase complex	Hs	cellular component	110	1.66e-28

GO (InterProScan)