Aniseed - Gene card

Gene Card

Best human hits

PIWIL1; PIWIL4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001907

Gene Model ID

KH2012:KH.C11.102

Location

KhC11:1598023..1615828

Transcript Models and Sequences

External Database Gene Card

External database links

7 results

Database	Gene ID
ENSEMBL	ENSCING00000009676
ENSEMBL	ENSCING00000016242
ENSEMBL	ENSCING00000017557
ENSEMBL	ENSCING00000020939
NCBI Reference Sequence	XM_009861844.2
NCBI Reference Sequence	XM_018814003.1
NCBI Reference Sequence	XM_018814004.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg052a12

Plate: R1CiGC23f14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
PAZ_dom_sf	SUPERFAMILY	PAZ domain superfamily
Piwi	ProSiteProfiles	Piwi domain
PAZ_dom	SMART	PAZ domain
Piwi	Pfam	Piwi domain
PAZ_dom	ProSiteProfiles	PAZ domain
PAZ_dom	Pfam	PAZ domain
RNaseH-like_sf	SUPERFAMILY	Ribonuclease H-like superfamily
Piwi	SMART	Piwi domain
RNaseH_sf	Gene3D	Ribonuclease H superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
multicellular organism development	Orthology	biological process
spermatogenesis	Orthology	biological process
hydrolase activity	Orthology	molecular function
protein kinase binding	Orthology	molecular function
cell differentiation	Orthology	biological process
metal ion binding	Orthology	molecular function
RNA metabolic process	Orthology	biological process
macromolecular complex	Orthology	cellular component
intracellular part	Orthology	cellular component
regulation of gene expression	Orthology	biological process
cell development	Orthology	biological process
negative regulation of gene expression	Orthology	biological process
cellular process	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
organelle organization	Orthology	biological process
DNA binding	Orthology	molecular function
DNA metabolic process	Orthology	biological process
gamete generation	Orthology	biological process
reproductive process	Orthology	biological process

GO (Orthology)

33 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
single-stranded RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
nuclease activity	Hs	molecular function
endonuclease activity	Hs	molecular function
endoribonuclease activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
polysome	Hs	cellular component
mRNA cap binding complex	Hs	cellular component
regulation of translation	Hs	biological process
multicellular organism development	Hs	biological process
spermatogenesis	Hs	biological process
spermatid development	Hs	biological process
negative regulation of transposition	Hs	biological process
hydrolase activity	Hs	molecular function
protein kinase binding	Hs	molecular function
cell differentiation	Hs	biological process
gene silencing by RNA	Hs	biological process
chromatoid body	Hs	cellular component
piRNA binding	Hs	molecular function
piRNA metabolic process	Hs	biological process
spermatogenesis, exchange of chromosomal proteins	Hs	biological process
DNA methylation involved in gamete generation	Hs	biological process
P granule	Hs	cellular component
metal ion binding	Hs	molecular function
meiotic cell cycle	Hs	biological process
piP-body	Hs	cellular component
nucleic acid phosphodiester bond hydrolysis	Hs	biological process
RNA phosphodiester bond hydrolysis, endonucleolytic	Hs	biological process
dense body	Hs	cellular component

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleic acid binding	Hs	molecular function	775
RNA binding	Hs	molecular function	775
single-stranded RNA binding	Hs	molecular function	775
mRNA binding	Hs	molecular function	775
nuclease activity	Hs	molecular function	775
endonuclease activity	Hs	molecular function	775
endoribonuclease activity	Hs	molecular function	775
protein binding	Hs	molecular function	775
nucleus	Hs	cellular component	775
cytoplasm	Hs	cellular component	775
polysome	Hs	cellular component	775
mRNA cap binding complex	Hs	cellular component	775
hydrolase activity	Hs	molecular function	775
protein kinase binding	Hs	molecular function	775
chromatoid body	Hs	cellular component	775
piRNA binding	Hs	molecular function	775
P granule	Hs	cellular component	775
metal ion binding	Hs	molecular function	775
piP-body	Hs	cellular component	659
dense body	Hs	cellular component	775

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	1.1E-136
protein binding	SMART	molecular function	1.0E-66