Gene Card
Best human hits
BMS1; TSR1
Unique Gene ID
Cirobu.g00002222
Gene Model ID
KH2012:KH.C11.392
Location
KhC11:3695070..3700780
Transcript Models and Sequences
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000020658 |
Gateway full ORF
2 results
cima825511
Plate: VES60_P22
cima8112284
Plate: VES74_K05
Gene collection 1 (N. Satoh)
2 results
cibd020n09
Plate: R1CiGC37f08
cieg097l13
Plate: R1CiGC40j02
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| BMS1_TSR1_C | Pfam | Ribosome biogenesis protein BMS1/TSR1, C-terminal |
| BMS1_TSR1_C | SMART | Ribosome biogenesis protein BMS1/TSR1, C-terminal |
| AARP2CN | Pfam | AARP2CN |
| G_Bms1/Tsr1_dom | ProSiteProfiles | Bms1/Tsr1-type G domain |
| AARP2CN | SMART | AARP2CN |
GOSlim
11 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| RNA binding | Orthology | molecular function |
| GTPase activity | Orthology | molecular function |
| ATP binding | Blast | molecular function |
| GTP binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| RNA processing | Orthology | biological process |
| macromolecular complex | Orthology | cellular component |
GO (Orthology)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| RNA binding | Hs | molecular function |
| GTPase activity | Hs | molecular function |
| GTP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytosol | Hs | cellular component |
| rRNA processing | Hs | biological process |
| preribosome, small subunit precursor | Hs | cellular component |
| U3 snoRNA binding | Hs | molecular function |
| ribosome biogenesis | Hs | biological process |
GO (Blast)
12 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 106 | 1.94e-23 |
| RNA binding | Hs | molecular function | 691 | 0.0 |
| GTPase activity | Hs | molecular function | 691 | 0.0 |
| ATP binding | Hs | molecular function | 106 | 1.94e-23 |
| GTP binding | Hs | molecular function | 691 | 0.0 |
| nucleus | Hs | cellular component | 691 | 0.0 |
| nucleoplasm | Hs | cellular component | 691 | 0.0 |
| nucleolus | Hs | cellular component | 691 | 0.0 |
| cytosol | Hs | cellular component | 691 | 0.0 |
| 90S preribosome | Hs | cellular component | 106 | 1.94e-23 |
| preribosome, small subunit precursor | Hs | cellular component | 691 | 0.0 |
| U3 snoRNA binding | Hs | molecular function | 691 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleus | SMART | cellular component | 1.1E-19 |
| ribosome biogenesis | SMART | biological process | 1.1E-19 |
