Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000022897
NCBI Reference Sequence	XM_002130501.3

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg015i08

Plate: R1CiGC17j04

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
ASB_dom_sf	Gene3D	Allosteric substrate binding domain superfamily
ASB_dom_sf	SUPERFAMILY	Allosteric substrate binding domain superfamily
PGDH	TIGRFAM	D-3-phosphoglycerate dehydrogenase
D-isomer_DH_CS	ProSitePatterns	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site
D-isomer_2_OHA_DH_cat_dom	Pfam	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
D-isomer_DH_NAD-bd	Pfam	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
D-isomer_DH_CS1	ProSitePatterns	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1

GOSlim

33 results

GO Term	Annotation Origin	Type
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
brain development	Orthology	biological process
protein C-terminus binding	Blast	molecular function
transcription factor binding	Blast	molecular function
metabolic process	Orthology	biological process
regulation of gene expression	Orthology	biological process
neurogenesis	Orthology	biological process
neuron projection development	Orthology	biological process
protein homodimerization activity	Blast	molecular function
myelin sheath	Orthology	cellular component
oxidation-reduction process	Orthology	biological process
extracellular exosome	Orthology	cellular component
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process
animal organ development	Orthology	biological process
central nervous system development	Orthology	biological process
cell development	Orthology	biological process
nervous system development	Orthology	biological process
nucleotide binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function
intracellular part	Blast	cellular component
macromolecular complex	Blast	cellular component
intracellular organelle part	Blast	cellular component
peroxisome	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
small molecule binding	Blast	molecular function
anion binding	Blast	molecular function

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
phosphoglycerate dehydrogenase activity	Hs	molecular function
cytosol	Hs	cellular component
glutamine metabolic process	Hs	biological process
glycine metabolic process	Hs	biological process
L-serine metabolic process	Hs	biological process
L-serine biosynthetic process	Hs	biological process
brain development	Hs	biological process
metabolic process	Hs	biological process
cellular amino acid biosynthetic process	Hs	biological process
electron carrier activity	Hs	molecular function
gamma-aminobutyric acid metabolic process	Hs	biological process
regulation of gene expression	Hs	biological process
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Hs	molecular function
spinal cord development	Hs	biological process
glial cell development	Hs	biological process
neural tube development	Hs	biological process
neurogenesis	Hs	biological process
electron transport chain	Hs	biological process
L-malate dehydrogenase activity	Hs	molecular function
neuron projection development	Hs	biological process
myelin sheath	Hs	cellular component
NAD binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
extracellular exosome	Hs	cellular component
G1 to G0 transition	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription corepressor activity	Hs	molecular function	124	5.48e-31
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	124	5.48e-31
phosphoglycerate dehydrogenase activity	Hs	molecular function	498	4.07e-173
protein binding	Hs	molecular function	124	5.48e-31
nucleus	Hs	cellular component	124	5.48e-31
nucleoplasm	Hs	cellular component	124	5.48e-31
transcription factor complex	Hs	cellular component	124	5.48e-31
cytoplasm	Hs	cellular component	124	5.48e-31
peroxisomal matrix	Hs	cellular component	110	1.65e-26
cytosol	Hs	cellular component	498	4.07e-173
protein C-terminus binding	Hs	molecular function	124	5.48e-31
transcription factor binding	Hs	molecular function	124	5.48e-31
glycerate dehydrogenase activity	Hs	molecular function	110	1.65e-26
electron carrier activity	Hs	molecular function	498	4.07e-173
oxidoreductase activity	Hs	molecular function	498	4.07e-173
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Hs	molecular function	498	4.07e-173
hydroxypyruvate reductase activity	Hs	molecular function	124	5.48e-31
transcriptional repressor complex	Hs	cellular component	124	5.48e-31
protein domain specific binding	Hs	molecular function	124	5.48e-31
L-malate dehydrogenase activity	Hs	molecular function	498	4.07e-173
glyoxylate reductase (NADP) activity	Hs	molecular function	124	5.48e-31
carboxylic acid binding	Hs	molecular function	110	1.65e-26
protein homodimerization activity	Hs	molecular function	124	5.48e-31
myelin sheath	Hs	cellular component	498	4.07e-173
NADP binding	Hs	molecular function	110	1.65e-26
NAD binding	Hs	molecular function	498	4.07e-173
extracellular exosome	Hs	cellular component	498	4.07e-173
NADPH binding	Hs	molecular function	110	1.65e-26
repressing transcription factor binding	Hs	molecular function	124	5.48e-31

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
phosphoglycerate dehydrogenase activity	TIGRFAM	molecular function	2.8E-137
L-serine biosynthetic process	TIGRFAM	biological process	2.8E-137
metabolic process	Pfam	biological process	4.0E-35
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Pfam	molecular function	4.0E-35
NAD binding	Pfam	molecular function	9.8E-57
oxidation-reduction process	Pfam	biological process	9.8E-57

Gene Card

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