Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.C3.581'

Gene Card

External Database Gene Card
Collections

Gateway full ORF

4 results

cima89365

Plate: VES57_D18

cima862818

Plate: VES65_J02

cima85108

Plate: VES56_D23

cima895198

Plate: VES71_P16

Gene collection 1 (N. Satoh)

6 results

cieg005g04

Plate: R1CiGC16a08

ciad013c19

Plate: R1CiGC02g14

cilv007e03

Plate: R1CiGC25f11

ciad075b02

Plate: R1CiGC07m18

cilv009g06

Plate: R1CiGC25b08

ciad018i13

Plate: R1CiGC02p24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
THDP-binding SUPERFAMILY Thiamin diphosphate-binding fold
Pyrv_DH_E1_asu_subgrp-y TIGRFAM Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
DH_E1 Pfam Dehydrogenase, E1 component
Ribosomal_S13 Hamap Ribosomal protein S13
Ribosomal_S13-like_H2TH SUPERFAMILY Ribosomal protein S13-like, H2TH
Ribosomal_S13_CS ProSitePatterns Ribosomal protein S13, conserved site
Ribosomal_S13 Pfam Ribosomal protein S13
Ribosomal_S13 ProSiteProfiles Ribosomal protein S13
30s_Rbsml_prot_S13_C Gene3D 30s ribosomal protein S13, C-terminal

GOSlim

29 results

GO Term Annotation Origin Type
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
structural constituent of ribosome Blast molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Orthology cellular component
cytoplasm Blast cellular component
mitochondrion Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Blast cellular component
ribosome Blast cellular component
focal adhesion Blast cellular component
metabolic process Orthology biological process
membrane Blast cellular component
myelin sheath Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
oxidation-reduction process Orthology biological process
extracellular exosome Blast cellular component
catalytic activity Orthology molecular function
organic substance metabolic process Orthology biological process
phosphate-containing compound metabolic process Orthology biological process
amide biosynthetic process Orthology biological process
cellular metabolic process Orthology biological process
transferase activity Orthology molecular function
cytoplasmic part Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Blast cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
pyruvate dehydrogenase activity Hs molecular function
pyruvate dehydrogenase (acetyl-transferring) activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
carbohydrate metabolic process Hs biological process
glucose metabolic process Hs biological process
acetyl-CoA biosynthetic process from pyruvate Hs biological process
pyruvate metabolic process Hs biological process
tricarboxylic acid cycle Hs biological process
metabolic process Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Hs molecular function
pyruvate dehydrogenase (NAD+) activity Hs molecular function
myelin sheath Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
pyruvate dehydrogenase complex Hs cellular component
oxidation-reduction process Hs biological process

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 267 4.45e-88
RNA binding Hs molecular function 267 4.45e-88
structural constituent of ribosome Hs molecular function 267 4.45e-88
pyruvate dehydrogenase activity Hs molecular function 460 1.17e-159
pyruvate dehydrogenase (acetyl-transferring) activity Hs molecular function 460 1.17e-159
protein binding Hs molecular function 460 1.17e-159
collagen trimer Hs cellular component 267 4.45e-88
intracellular Hs cellular component 267 4.45e-88
nucleus Hs cellular component 460 1.17e-159
nucleoplasm Hs cellular component 267 4.45e-88
nucleolus Hs cellular component 460 1.17e-159
cytoplasm Hs cellular component 267 4.45e-88
mitochondrion Hs cellular component 460 1.17e-159
mitochondrial matrix Hs cellular component 460 1.17e-159
cytosol Hs cellular component 267 4.45e-88
ribosome Hs cellular component 267 4.45e-88
focal adhesion Hs cellular component 267 4.45e-88
small ribosomal subunit Hs cellular component 267 4.45e-88
membrane Hs cellular component 267 4.45e-88
oxidoreductase activity Hs molecular function 460 1.17e-159
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Hs molecular function 460 1.17e-159
rRNA binding Hs molecular function 267 4.45e-88
cytosolic small ribosomal subunit Hs cellular component 267 4.45e-88
intracellular ribonucleoprotein complex Hs cellular component 267 4.45e-88
pyruvate dehydrogenase (NAD+) activity Hs molecular function 460 1.17e-159
myelin sheath Hs cellular component 460 1.17e-159
intracellular membrane-bounded organelle Hs cellular component 460 1.17e-159
pyruvate dehydrogenase complex Hs cellular component 460 1.17e-159
extracellular exosome Hs cellular component 267 4.45e-88

GO (InterProScan)

11 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 3.3E-36
RNA binding Pfam molecular function 4.6E-54
structural constituent of ribosome Pfam molecular function 4.6E-54
pyruvate dehydrogenase (acetyl-transferring) activity TIGRFAM molecular function 5.4E-129
intracellular Pfam cellular component 4.6E-54
ribosome Pfam cellular component 4.6E-54
acetyl-CoA biosynthetic process from pyruvate TIGRFAM biological process 5.4E-129
translation Pfam biological process 4.6E-54
metabolic process Pfam biological process 2.8E-116
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Pfam molecular function 2.8E-116
intracellular membrane-bounded organelle TIGRFAM cellular component 5.4E-129