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GENE CARD

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Gene Card

Best human hits

CTSF; CTSK; CTSW

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003279

Gene Model ID

KH2012:KH.C12.71

Location

KhC12:371910..380282

Transcript Models and Sequences

  KH2012:KH.C12.71.v1.B.SL1-1
KH2012:KH.C12.71.v2.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000023694
Collections

Gateway full ORF

2 results

cima860955

Plate: VES64_L17

cien190330

Plate: VES99_P17

Gene collection 1 (N. Satoh)

2 results

cilv015b08

Plate: R1CiGC26a10

cilv021b08

Plate: R1CiGC26h14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Peptidase_C1A_C Pfam Peptidase C1A, papain C-terminal
Prot_inhib_I29 Pfam Cathepsin propeptide inhibitor domain (I29)
Pept_cys_AS ProSitePatterns Cysteine peptidase, cysteine active site
Peptidase_C1A_C PRINTS Peptidase C1A, papain C-terminal
Peptidase_C1A PANTHER Peptidase C1A
Peptidase_C1A_C SMART Peptidase C1A, papain C-terminal
Pept_his_AS ProSitePatterns Cysteine peptidase, histidine active site
Prot_inhib_I29 SMART Cathepsin propeptide inhibitor domain (I29)
Pept_asp_AS ProSitePatterns Cysteine peptidase, asparagine active site

GOSlim

28 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
protein binding Blast molecular function
extracellular region Orthology cellular component
extracellular space Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
lysosome Orthology cellular component
proteolysis Orthology biological process
immune response Orthology biological process
peptidase activity Orthology molecular function
membrane Orthology cellular component
hydrolase activity Orthology molecular function
intracellular membrane-bounded organelle Blast cellular component
extracellular exosome Orthology cellular component
extracellular vesicle Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
endopeptidase activity Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
immune system process Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
vacuolar part Orthology cellular component
macromolecular complex binding Blast molecular function
endosome Blast cellular component
carbohydrate derivative binding Blast molecular function

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
platelet degranulation Hs biological process
cysteine-type endopeptidase activity Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
lysosome Hs cellular component
proteolysis Hs biological process
immune response Hs biological process
peptidase activity Hs molecular function
cysteine-type peptidase activity Hs molecular function
membrane Hs cellular component
hydrolase activity Hs molecular function
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
platelet dense granule lumen Hs cellular component
lysosomal lumen Hs cellular component
proteolysis involved in cellular protein catabolic process Hs biological process
extracellular exosome Hs cellular component
extracellular vesicle Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fibronectin binding Hs molecular function 188 8.12e-56
cysteine-type endopeptidase activity Hs molecular function 305 4.64e-99
serine-type endopeptidase activity Hs molecular function 188 8.12e-56
protein binding Hs molecular function 188 8.12e-56
collagen binding Hs molecular function 188 8.12e-56
extracellular region Hs cellular component 201 3.10e-60
extracellular space Hs cellular component 305 4.64e-99
nucleoplasm Hs cellular component 188 8.12e-56
cytoplasm Hs cellular component 188 8.12e-56
lysosome Hs cellular component 305 4.64e-99
peptidase activity Hs molecular function 305 4.64e-99
cysteine-type peptidase activity Hs molecular function 305 4.64e-99
membrane Hs cellular component 201 3.10e-60
hydrolase activity Hs molecular function 305 4.64e-99
platelet dense granule lumen Hs cellular component 201 3.10e-60
endolysosome lumen Hs cellular component 188 8.12e-56
lysosomal lumen Hs cellular component 305 4.64e-99
intracellular membrane-bounded organelle Hs cellular component 188 8.12e-56
proteoglycan binding Hs molecular function 188 8.12e-56
extracellular exosome Hs cellular component 305 4.64e-99
extracellular vesicle Hs cellular component 305 4.64e-99

GO (InterProScan)

2 results

GO Term Analysis Type e-value
proteolysis SMART biological process 2.9E-104
cysteine-type peptidase activity PANTHER molecular function 1.7E-137

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