Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000001546

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb1h12

Plate: R1CiGC28h09

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

16 results

IPR Term	Analysis	Definition
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
S1_domain	ProSiteProfiles	S1 domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
Helicase-assoc_dom	SMART	Helicase-associated domain
DNA/RNA_helicase_DEAH_CS	ProSitePatterns	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
NA-bd_OB-fold	SUPERFAMILY	Nucleic acid-binding, OB-fold
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	Pfam	Helicase, C-terminal
Helicase_C	SMART	Helicase, C-terminal
Helicase_C	CDD	Helicase, C-terminal
S1_dom	SMART	RNA-binding domain, S1
Helicase-assoc_dom	Pfam	Helicase-associated domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
DUF1605	Pfam	Domain of unknown function DUF1605
S1_domain	Pfam	S1 domain

GOSlim

18 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
RNA processing	Orthology	biological process
mRNA processing	Orthology	biological process
RNA splicing	Orthology	biological process
nuclear body	Orthology	cellular component
hydrolase activity	Orthology	molecular function
identical protein binding	Orthology	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function
nuclear part	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
mRNA splicing, via spliceosome	Hs	biological process
nucleic acid binding	Hs	molecular function
RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
spliceosomal complex	Hs	cellular component
cytoplasm	Hs	cellular component
RNA processing	Hs	biological process
mRNA processing	Hs	biological process
RNA splicing	Hs	biological process
nuclear body	Hs	cellular component
hydrolase activity	Hs	molecular function
identical protein binding	Hs	molecular function
U2-type catalytic step 2 spliceosome	Hs	cellular component
catalytic step 2 spliceosome	Hs	cellular component

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
nucleotide binding	Hs	molecular function	1643
nucleic acid binding	Hs	molecular function	1643
RNA binding	Hs	molecular function	1643
RNA helicase activity	Hs	molecular function	792
ATP-dependent RNA helicase activity	Hs	molecular function	1643
helicase activity	Hs	molecular function	1643
protein binding	Hs	molecular function	1643
ATP binding	Hs	molecular function	1643
nucleus	Hs	cellular component	1643
nucleoplasm	Hs	cellular component	1643
spliceosomal complex	Hs	cellular component	1643
cytoplasm	Hs	cellular component	1643
nuclear body	Hs	cellular component	1643
hydrolase activity	Hs	molecular function	1643
ATPase activity	Hs	molecular function	792
identical protein binding	Hs	molecular function	1643
U2-type catalytic step 2 spliceosome	Hs	cellular component	1643
catalytic step 2 spliceosome	Hs	cellular component	1643

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	1.5E-13
helicase activity	SMART	molecular function	2.1E-37
ATP binding	Pfam	molecular function	3.6E-8

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

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Transcript Models and Sequences