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Gene Card

Best human hits

CHAT; CRAT; CROT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003506

Gene Model ID

KH2012:KH.C14.10

Location

KhC14:2348591..2351103

Transcript Models and Sequences

  KH2012:KH.C14.10.v1.C.SL2-1
KH2012:KH.C14.10.v1.C.SL3-1
KH2012:KH.C14.10.v2.C.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
NCBI Reference Sequence XM_002121263.3
Collections

Gateway full ORF

2 results

cien63522

Plate: VES80_O05

cima8102492

Plate: VES73_N07

Gene collection 1 (N. Satoh)

2 results

cibd082a12

Plate: R1CiGC39c09

cieg084f24

Plate: R1CiGC40b15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Carn_acyl_trans PANTHER Acyltransferase ChoActase/COT/CPT
Carn_acyl_trans Pfam Acyltransferase ChoActase/COT/CPT
Carn_acyl_trans ProSitePatterns Acyltransferase ChoActase/COT/CPT

GOSlim

16 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
peroxisome Blast cellular component
endoplasmic reticulum Blast cellular component
cytosol Blast cellular component
membrane Blast cellular component
transferase activity Blast molecular function
intracellular membrane-bounded organelle Blast cellular component
synapse Blast cellular component
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
carnitine O-acetyltransferase activity Hs molecular function 254 5.76e-76
choline O-acetyltransferase activity Hs molecular function 233 2.58e-67
receptor binding Hs molecular function 505 1.43e-172
nucleus Hs cellular component 233 2.58e-67
cytoplasm Hs cellular component 233 2.58e-67
mitochondrion Hs cellular component 505 1.43e-172
mitochondrial inner membrane Hs cellular component 254 5.76e-76
peroxisome Hs cellular component 505 1.43e-172
peroxisomal matrix Hs cellular component 505 1.43e-172
endoplasmic reticulum Hs cellular component 254 5.76e-76
cytosol Hs cellular component 233 2.58e-67
carnitine O-octanoyltransferase activity Hs molecular function 505 1.43e-172
membrane Hs cellular component 254 5.76e-76
transferase activity Hs molecular function 505 1.43e-172
transferase activity, transferring acyl groups Hs molecular function 505 1.43e-172
intracellular membrane-bounded organelle Hs cellular component 505 1.43e-172
synapse Hs cellular component 233 2.58e-67
presynapse Hs cellular component 233 2.58e-67

GO (InterProScan)

1 result

GO Term Analysis Type e-value
transferase activity, transferring acyl groups PANTHER molecular function 2.9E-197

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