Gene Card
Best human hits
FP565260.1; GNB5; PWP2
Unique Gene ID
Cirobu.g00003643
Gene Model ID
KH2012:KH.C14.225
Location
KhC14:129456..146520
Transcript Models and Sequences
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000000362 |
| NCBI Reference Sequence | XM_009862457.2 |
Gateway full ORF
4 results
cien77676
Plate: VES82_F12
cima8102513
Plate: VES73_P06
cien157009
Plate: VES94_G13
cien172039
Plate: VES96_A23
Gene collection 1 (N. Satoh)
3 results
n/a
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Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat | Pfam | WD40 repeat |
| SSU_processome_Utp12 | Pfam | Small-subunit processome, Utp12 |
| WD40_repeat | SMART | WD40 repeat |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| PWP2 | PANTHER | Periodic tryptophan protein 2 |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA binding | Orthology | molecular function |
| GTPase activity | Blast | molecular function |
| signal transducer activity | Blast | molecular function |
| GTPase activator activity | Blast | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| nucleolus | Orthology | cellular component |
| cytosol | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| membrane | Blast | cellular component |
| myelin sheath | Blast | cellular component |
| RNA processing | Orthology | biological process |
| macromolecular complex | Orthology | cellular component |
| organelle part | Blast | cellular component |
| cell projection part | Blast | cellular component |
| neuron projection | Blast | cellular component |
| neuron part | Blast | cellular component |
GO (Orthology)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ribosomal small subunit assembly | Hs | biological process |
| maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Hs | biological process |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| nucleolus | Hs | cellular component |
| rRNA processing | Hs | biological process |
| snoRNA binding | Hs | molecular function |
| small-subunit processome | Hs | cellular component |
| Pwp2p-containing subcomplex of 90S preribosome | Hs | cellular component |
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| photoreceptor outer segment | Hs | cellular component | 109 | 2.36e-25 |
| photoreceptor inner segment | Hs | cellular component | 109 | 2.36e-25 |
| RNA binding | Hs | molecular function | 968 | 0.0 |
| GTPase activity | Hs | molecular function | 109 | 2.36e-25 |
| signal transducer activity | Hs | molecular function | 109 | 2.36e-25 |
| GTPase activator activity | Hs | molecular function | 109 | 2.36e-25 |
| protein binding | Hs | molecular function | 968 | 0.0 |
| nucleus | Hs | cellular component | 968 | 0.0 |
| nucleoplasm | Hs | cellular component | 968 | 0.0 |
| nucleolus | Hs | cellular component | 968 | 0.0 |
| cytosol | Hs | cellular component | 109 | 2.36e-25 |
| plasma membrane | Hs | cellular component | 109 | 2.36e-25 |
| membrane | Hs | cellular component | 109 | 2.36e-25 |
| snoRNA binding | Hs | molecular function | 968 | 0.0 |
| G-protein gamma-subunit binding | Hs | molecular function | 109 | 2.36e-25 |
| small-subunit processome | Hs | cellular component | 968 | 0.0 |
| Pwp2p-containing subcomplex of 90S preribosome | Hs | cellular component | 968 | 0.0 |
| myelin sheath | Hs | cellular component | 109 | 2.36e-25 |
| chaperone binding | Hs | molecular function | 109 | 2.36e-25 |
| GTPase activator complex | Hs | cellular component | 109 | 2.36e-25 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 9.16E-60 |
