Gene Card
Best human hits
C6; C8A; C9
Unique Gene ID
Cirobu.g00003798
Gene Model ID
KH2012:KH.C14.369
Location
KhC14:771345..782869
Transcript Models and Sequences
KH2012:KH.C14.369.v1.A.nonSL2-1
KH2012:KH.C14.369.v1.R.ND1-1
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000020171 |
| NCBI Reference Sequence | XM_002130752.4 |
Gene collection 1 (N. Satoh)
1 result
ciad008b10
Plate: R1CiGC01b24
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
17 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TSP1_rpt_sf | SUPERFAMILY | Thrombospondin type-1 (TSP1) repeat superfamily |
| TSP1_rpt_sf | Gene3D | Thrombospondin type-1 (TSP1) repeat superfamily |
| LDLR_class-A_CS | ProSitePatterns | Low-density lipoprotein (LDL) receptor class A, conserved site |
| TSP1_rpt | ProSiteProfiles | Thrombospondin type-1 (TSP1) repeat |
| MACPF | SMART | Membrane attack complex component/perforin (MACPF) domain |
| MAC_perforin | PRINTS | Membrane attack complex component/perforin/complement C9 |
| LDL_receptor-like_sf | SUPERFAMILY | LDL receptor-like superfamily |
| MACPF_CS | ProSitePatterns | Membrane attack complex component/perforin domain, conserved site |
| TSP1_rpt | Pfam | Thrombospondin type-1 (TSP1) repeat |
| MACPF | Pfam | Membrane attack complex component/perforin (MACPF) domain |
| LDrepeatLR_classA_rpt | CDD | Low-density lipoprotein (LDL) receptor class A repeat |
| EGF-like_CS | ProSitePatterns | EGF-like, conserved site |
| MACPF | ProSiteProfiles | Membrane attack complex component/perforin (MACPF) domain |
| TSP1_rpt | SMART | Thrombospondin type-1 (TSP1) repeat |
| LDrepeatLR_classA_rpt | Pfam | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | SMART | Low-density lipoprotein (LDL) receptor class A repeat |
| LDrepeatLR_classA_rpt | ProSiteProfiles | Low-density lipoprotein (LDL) receptor class A repeat |
GOSlim
11 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| cytosol | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| immune response | InterProScan | biological process |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| complement binding | Hs | molecular function | 219 | 4.25e-64 |
| protein binding | Hs | molecular function | 283 | 5.37e-85 |
| extracellular region | Hs | cellular component | 283 | 5.37e-85 |
| membrane attack complex | Hs | cellular component | 283 | 5.37e-85 |
| extracellular space | Hs | cellular component | 219 | 4.25e-64 |
| cytosol | Hs | cellular component | 193 | 1.17e-54 |
| plasma membrane | Hs | cellular component | 219 | 4.25e-64 |
| integral component of plasma membrane | Hs | cellular component | 193 | 1.17e-54 |
| membrane | Hs | cellular component | 219 | 4.25e-64 |
| integral component of membrane | Hs | cellular component | 219 | 4.25e-64 |
| other organism cell membrane | Hs | cellular component | 193 | 1.17e-54 |
| other organism membrane | Hs | cellular component | 193 | 1.17e-54 |
| extracellular exosome | Hs | cellular component | 283 | 5.37e-85 |
| blood microparticle | Hs | cellular component | 219 | 4.25e-64 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 3.01E-8 |
| membrane attack complex | PRINTS | cellular component | 1.8E-23 |
| immune response | PRINTS | biological process | 1.8E-23 |
